Protein–RNA interactions for Protein: Q494V2

CFAP100, Cilia- and flagella-associated protein 100, humanhuman

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP100Q494V2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
CFAP100Q494V2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP100Q494V2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CFAP100Q494V2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP100Q494V2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP100Q494V2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.01■■■□□ 2.87
CFAP100Q494V2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
CFAP100Q494V2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.97■■■□□ 2.87
CFAP100Q494V2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
CFAP100Q494V2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
CFAP100Q494V2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.95■■■□□ 2.87
CFAP100Q494V2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CFAP100Q494V2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CFAP100Q494V2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFAP100Q494V2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.91■■■□□ 2.86
CFAP100Q494V2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CFAP100Q494V2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP100Q494V2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP100Q494V2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.89■■■□□ 2.86
CFAP100Q494V2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP100Q494V2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.88■■■□□ 2.85
CFAP100Q494V2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.87■■■□□ 2.85
CFAP100Q494V2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.87■■■□□ 2.85
CFAP100Q494V2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFAP100Q494V2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP100Q494V2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP100Q494V2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.85■■■□□ 2.85
CFAP100Q494V2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.85■■■□□ 2.85
CFAP100Q494V2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.84■■■□□ 2.85
CFAP100Q494V2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFAP100Q494V2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CFAP100Q494V2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CFAP100Q494V2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
CFAP100Q494V2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CFAP100Q494V2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CFAP100Q494V2 ZNRF2P2-203ENST00000454624 420 ntBASIC32.8■■■□□ 2.84
CFAP100Q494V2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CFAP100Q494V2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.79■■■□□ 2.84
CFAP100Q494V2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CFAP100Q494V2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.78■■■□□ 2.84
CFAP100Q494V2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CFAP100Q494V2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CFAP100Q494V2 HLA-V-202ENST00000446817 847 ntBASIC32.77■■■□□ 2.84
CFAP100Q494V2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.77■■■□□ 2.84
CFAP100Q494V2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CFAP100Q494V2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.75■■■□□ 2.83
CFAP100Q494V2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CFAP100Q494V2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.74■■■□□ 2.83
CFAP100Q494V2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.73■■■□□ 2.83
CFAP100Q494V2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.73■■■□□ 2.83
CFAP100Q494V2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP100Q494V2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP100Q494V2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.72■■■□□ 2.83
CFAP100Q494V2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFAP100Q494V2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CFAP100Q494V2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CFAP100Q494V2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.7■■■□□ 2.83
CFAP100Q494V2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CFAP100Q494V2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFAP100Q494V2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CFAP100Q494V2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CFAP100Q494V2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP100Q494V2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.66■■■□□ 2.82
CFAP100Q494V2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CFAP100Q494V2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.65■■■□□ 2.82
CFAP100Q494V2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFAP100Q494V2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFAP100Q494V2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.64■■■□□ 2.82
CFAP100Q494V2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFAP100Q494V2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CFAP100Q494V2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.63■■■□□ 2.81
CFAP100Q494V2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CFAP100Q494V2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.6■■■□□ 2.81
CFAP100Q494V2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.59■■■□□ 2.81
CFAP100Q494V2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CFAP100Q494V2 DUX4L29-201ENST00000425409 679 ntBASIC32.59■■■□□ 2.81
CFAP100Q494V2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.59■■■□□ 2.81
CFAP100Q494V2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CFAP100Q494V2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CFAP100Q494V2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
CFAP100Q494V2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP100Q494V2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CFAP100Q494V2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
CFAP100Q494V2 AC021231.2-201ENST00000594613 730 ntBASIC32.51■■■□□ 2.79
CFAP100Q494V2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.5■■■□□ 2.79
CFAP100Q494V2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
CFAP100Q494V2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP100Q494V2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP100Q494V2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.49■■■□□ 2.79
CFAP100Q494V2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
CFAP100Q494V2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.47■■■□□ 2.79
CFAP100Q494V2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
CFAP100Q494V2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.46■■■□□ 2.79
CFAP100Q494V2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.46■■■□□ 2.79
CFAP100Q494V2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.45■■■□□ 2.79
CFAP100Q494V2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP100Q494V2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.45■■■□□ 2.79
CFAP100Q494V2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
CFAP100Q494V2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFAP100Q494V2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms