Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CX3CL1P78423 RARRES2P7-201ENST00000567349 469 ntBASIC21.72■■□□□ 1.07
CX3CL1P78423 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CX3CL1P78423 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CX3CL1P78423 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.72■■□□□ 1.07
CX3CL1P78423 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CX3CL1P78423 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.69■■□□□ 1.06
CX3CL1P78423 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.69■■□□□ 1.06
CX3CL1P78423 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CX3CL1P78423 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CX3CL1P78423 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CX3CL1P78423 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CX3CL1P78423 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CX3CL1P78423 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CX3CL1P78423 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CX3CL1P78423 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CX3CL1P78423 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CX3CL1P78423 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.63■■□□□ 1.05
CX3CL1P78423 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CX3CL1P78423 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.62■■□□□ 1.05
CX3CL1P78423 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CX3CL1P78423 AL133380.1-201ENST00000506013 324 ntBASIC21.61■■□□□ 1.05
CX3CL1P78423 SETD8P1-201ENST00000623146 1180 ntBASIC21.61■■□□□ 1.05
CX3CL1P78423 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CX3CL1P78423 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CX3CL1P78423 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CX3CL1P78423 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CX3CL1P78423 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CX3CL1P78423 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CX3CL1P78423 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CX3CL1P78423 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CX3CL1P78423 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CX3CL1P78423 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CX3CL1P78423 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CX3CL1P78423 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CX3CL1P78423 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CX3CL1P78423 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CX3CL1P78423 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CX3CL1P78423 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CX3CL1P78423 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CX3CL1P78423 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CX3CL1P78423 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CX3CL1P78423 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CX3CL1P78423 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CX3CL1P78423 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CX3CL1P78423 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.47■■□□□ 1.03
CX3CL1P78423 AC097358.2-201ENST00000607541 1159 ntBASIC21.47■■□□□ 1.03
CX3CL1P78423 WASH5P-204ENST00000632292 975 ntBASIC21.47■■□□□ 1.03
CX3CL1P78423 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CX3CL1P78423 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CX3CL1P78423 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.46■■□□□ 1.03
CX3CL1P78423 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CX3CL1P78423 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.45■■□□□ 1.02
CX3CL1P78423 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CX3CL1P78423 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
CX3CL1P78423 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CX3CL1P78423 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CX3CL1P78423 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CX3CL1P78423 AC136428.2-201ENST00000563187 214 ntBASIC21.42■■□□□ 1.02
CX3CL1P78423 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CX3CL1P78423 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CX3CL1P78423 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CX3CL1P78423 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.4■■□□□ 1.02
CX3CL1P78423 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.39■■□□□ 1.01
CX3CL1P78423 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CX3CL1P78423 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.39■■□□□ 1.01
CX3CL1P78423 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CX3CL1P78423 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
CX3CL1P78423 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CX3CL1P78423 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.38■■□□□ 1.01
CX3CL1P78423 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CX3CL1P78423 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.38■■□□□ 1.01
CX3CL1P78423 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CX3CL1P78423 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CX3CL1P78423 AL161658.1-201ENST00000623641 1967 ntBASIC21.37■■□□□ 1.01
CX3CL1P78423 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CX3CL1P78423 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CX3CL1P78423 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CX3CL1P78423 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CX3CL1P78423 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CX3CL1P78423 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CX3CL1P78423 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CX3CL1P78423 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CX3CL1P78423 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CX3CL1P78423 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CX3CL1P78423 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CX3CL1P78423 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.35■■□□□ 1.01
CX3CL1P78423 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CX3CL1P78423 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CX3CL1P78423 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CX3CL1P78423 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CX3CL1P78423 CAHM-201ENST00000604200 896 ntBASIC21.34■■□□□ 1.01
CX3CL1P78423 AL391121.1-201ENST00000607967 1349 ntBASIC21.33■■□□□ 1.01
CX3CL1P78423 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CX3CL1P78423 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CX3CL1P78423 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.32■■□□□ 1
CX3CL1P78423 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.32■■□□□ 1
CX3CL1P78423 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.31■■□□□ 1
CX3CL1P78423 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.31■■□□□ 1
CX3CL1P78423 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms