Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RPP38P78345 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RPP38P78345 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RPP38P78345 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.46■■□□□ 1.67
RPP38P78345 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RPP38P78345 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RPP38P78345 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
RPP38P78345 SETD8P1-201ENST00000623146 1180 ntBASIC25.45■■□□□ 1.66
RPP38P78345 ABCB10P1-201ENST00000614297 2181 ntBASIC25.44■■□□□ 1.66
RPP38P78345 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.44■■□□□ 1.66
RPP38P78345 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPP38P78345 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RPP38P78345 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPP38P78345 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.42■■□□□ 1.66
RPP38P78345 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.41■■□□□ 1.66
RPP38P78345 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RPP38P78345 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPP38P78345 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPP38P78345 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPP38P78345 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPP38P78345 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPP38P78345 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RPP38P78345 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.36■■□□□ 1.65
RPP38P78345 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPP38P78345 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.36■■□□□ 1.65
RPP38P78345 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RPP38P78345 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.35■■□□□ 1.65
RPP38P78345 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
RPP38P78345 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPP38P78345 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RPP38P78345 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.33■■□□□ 1.65
RPP38P78345 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPP38P78345 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
RPP38P78345 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RPP38P78345 AC097358.2-201ENST00000607541 1159 ntBASIC25.31■■□□□ 1.64
RPP38P78345 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPP38P78345 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPP38P78345 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPP38P78345 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.29■■□□□ 1.64
RPP38P78345 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
RPP38P78345 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPP38P78345 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RPP38P78345 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.28■■□□□ 1.64
RPP38P78345 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPP38P78345 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.27■■□□□ 1.64
RPP38P78345 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RPP38P78345 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPP38P78345 ABCB10P3-201ENST00000561950 2166 ntBASIC25.27■■□□□ 1.64
RPP38P78345 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RPP38P78345 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RPP38P78345 AC120057.4-201ENST00000624722 1615 ntBASIC25.26■■□□□ 1.63
RPP38P78345 AL133380.1-201ENST00000506013 324 ntBASIC25.25■■□□□ 1.63
RPP38P78345 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPP38P78345 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RPP38P78345 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.24■■□□□ 1.63
RPP38P78345 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RPP38P78345 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RPP38P78345 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RPP38P78345 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
RPP38P78345 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.22■■□□□ 1.63
RPP38P78345 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RPP38P78345 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.22■■□□□ 1.63
RPP38P78345 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RPP38P78345 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RPP38P78345 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RPP38P78345 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RPP38P78345 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RPP38P78345 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.19■■□□□ 1.62
RPP38P78345 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RPP38P78345 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RPP38P78345 AC136428.2-201ENST00000563187 214 ntBASIC25.19■■□□□ 1.62
RPP38P78345 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.19■■□□□ 1.62
RPP38P78345 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
RPP38P78345 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RPP38P78345 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RPP38P78345 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RPP38P78345 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RPP38P78345 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RPP38P78345 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RPP38P78345 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RPP38P78345 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.14■■□□□ 1.62
RPP38P78345 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RPP38P78345 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.14■■□□□ 1.62
RPP38P78345 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.13■■□□□ 1.61
RPP38P78345 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.13■■□□□ 1.61
RPP38P78345 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.13■■□□□ 1.61
RPP38P78345 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPP38P78345 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPP38P78345 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPP38P78345 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.1■■□□□ 1.61
RPP38P78345 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPP38P78345 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.09■■□□□ 1.61
RPP38P78345 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
RPP38P78345 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPP38P78345 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPP38P78345 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPP38P78345 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
RPP38P78345 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.05■■□□□ 1.6
RPP38P78345 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RPP38P78345 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms