Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC139426.1-201ENST00000568218 2529 ntBASIC23.42■■□□□ 1.34
SEC61A1P61619 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEC61A1P61619 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.42■■□□□ 1.34
SEC61A1P61619 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.41■■□□□ 1.34
SEC61A1P61619 ABCB10P3-201ENST00000561950 2166 ntBASIC23.41■■□□□ 1.34
SEC61A1P61619 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.4■■□□□ 1.34
SEC61A1P61619 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.4■■□□□ 1.34
SEC61A1P61619 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.39■■□□□ 1.33
SEC61A1P61619 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.39■■□□□ 1.33
SEC61A1P61619 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEC61A1P61619 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SEC61A1P61619 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEC61A1P61619 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SEC61A1P61619 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.37■■□□□ 1.33
SEC61A1P61619 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SEC61A1P61619 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SEC61A1P61619 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SEC61A1P61619 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SEC61A1P61619 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SEC61A1P61619 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SEC61A1P61619 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SEC61A1P61619 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.35■■□□□ 1.33
SEC61A1P61619 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.34■■□□□ 1.33
SEC61A1P61619 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SEC61A1P61619 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SEC61A1P61619 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.33■■□□□ 1.33
SEC61A1P61619 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.32■■□□□ 1.32
SEC61A1P61619 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.32■■□□□ 1.32
SEC61A1P61619 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.31■■□□□ 1.32
SEC61A1P61619 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SEC61A1P61619 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.3■■□□□ 1.32
SEC61A1P61619 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.3■■□□□ 1.32
SEC61A1P61619 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SEC61A1P61619 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SEC61A1P61619 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SEC61A1P61619 SETD8P1-201ENST00000623146 1180 ntBASIC23.29■■□□□ 1.32
SEC61A1P61619 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SEC61A1P61619 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SEC61A1P61619 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SEC61A1P61619 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SEC61A1P61619 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
SEC61A1P61619 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SEC61A1P61619 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SEC61A1P61619 AC097358.2-201ENST00000607541 1159 ntBASIC23.21■■□□□ 1.31
SEC61A1P61619 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SEC61A1P61619 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.2■■□□□ 1.3
SEC61A1P61619 AC136428.2-201ENST00000563187 214 ntBASIC23.2■■□□□ 1.3
SEC61A1P61619 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SEC61A1P61619 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SEC61A1P61619 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.18■■□□□ 1.3
SEC61A1P61619 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.17■■□□□ 1.3
SEC61A1P61619 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.17■■□□□ 1.3
SEC61A1P61619 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEC61A1P61619 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.14■■□□□ 1.29
SEC61A1P61619 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SEC61A1P61619 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
SEC61A1P61619 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SEC61A1P61619 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SEC61A1P61619 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SEC61A1P61619 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SEC61A1P61619 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.12■■□□□ 1.29
SEC61A1P61619 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SEC61A1P61619 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SEC61A1P61619 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.12■■□□□ 1.29
SEC61A1P61619 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SEC61A1P61619 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.11■■□□□ 1.29
SEC61A1P61619 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SEC61A1P61619 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.11■■□□□ 1.29
SEC61A1P61619 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.11■■□□□ 1.29
SEC61A1P61619 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SEC61A1P61619 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SEC61A1P61619 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SEC61A1P61619 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SEC61A1P61619 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SEC61A1P61619 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SEC61A1P61619 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.08■■□□□ 1.29
SEC61A1P61619 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.08■■□□□ 1.29
SEC61A1P61619 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEC61A1P61619 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.08■■□□□ 1.29
SEC61A1P61619 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.08■■□□□ 1.29
SEC61A1P61619 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SEC61A1P61619 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEC61A1P61619 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEC61A1P61619 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.06■■□□□ 1.28
SEC61A1P61619 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEC61A1P61619 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEC61A1P61619 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SEC61A1P61619 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SEC61A1P61619 AL133380.1-201ENST00000506013 324 ntBASIC23.04■■□□□ 1.28
SEC61A1P61619 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SEC61A1P61619 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SEC61A1P61619 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms