Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC37.34■■■■□ 3.57
ZC3H6P61129 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
ZC3H6P61129 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC37.34■■■■□ 3.57
ZC3H6P61129 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
ZC3H6P61129 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC37.31■■■■□ 3.56
ZC3H6P61129 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
ZC3H6P61129 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
ZC3H6P61129 HGH1-207ENST00000628266 258 ntTSL 5 BASIC37.27■■■■□ 3.56
ZC3H6P61129 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC37.25■■■■□ 3.55
ZC3H6P61129 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC37.24■■■■□ 3.55
ZC3H6P61129 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC37.23■■■■□ 3.55
ZC3H6P61129 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
ZC3H6P61129 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
ZC3H6P61129 WASH5P-204ENST00000632292 975 ntBASIC37.22■■■■□ 3.55
ZC3H6P61129 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ZC3H6P61129 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ZC3H6P61129 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC37.2■■■■□ 3.55
ZC3H6P61129 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC37.19■■■■□ 3.54
ZC3H6P61129 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC37.17■■■■□ 3.54
ZC3H6P61129 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
ZC3H6P61129 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC37.17■■■■□ 3.54
ZC3H6P61129 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC37.16■■■■□ 3.54
ZC3H6P61129 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC37.15■■■■□ 3.54
ZC3H6P61129 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC37.14■■■■□ 3.54
ZC3H6P61129 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC37.13■■■■□ 3.54
ZC3H6P61129 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
ZC3H6P61129 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
ZC3H6P61129 RPS2-202ENST00000526522 924 ntTSL 2 BASIC37.11■■■■□ 3.53
ZC3H6P61129 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
ZC3H6P61129 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
ZC3H6P61129 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC37.09■■■■□ 3.53
ZC3H6P61129 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
ZC3H6P61129 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC37.07■■■■□ 3.52
ZC3H6P61129 RPS2-209ENST00000529806 993 ntTSL 3 BASIC37.07■■■■□ 3.52
ZC3H6P61129 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC37.06■■■■□ 3.52
ZC3H6P61129 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
ZC3H6P61129 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
ZC3H6P61129 DUX4L29-201ENST00000425409 679 ntBASIC37.03■■■■□ 3.52
ZC3H6P61129 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC37.03■■■■□ 3.52
ZC3H6P61129 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC37.02■■■■□ 3.52
ZC3H6P61129 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
ZC3H6P61129 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
ZC3H6P61129 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
ZC3H6P61129 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
ZC3H6P61129 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ZC3H6P61129 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ZC3H6P61129 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ZC3H6P61129 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC36.97■■■■□ 3.51
ZC3H6P61129 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
ZC3H6P61129 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
ZC3H6P61129 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
ZC3H6P61129 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC36.93■■■■□ 3.5
ZC3H6P61129 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
ZC3H6P61129 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
ZC3H6P61129 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC36.93■■■■□ 3.5
ZC3H6P61129 AC021231.2-201ENST00000594613 730 ntBASIC36.92■■■■□ 3.5
ZC3H6P61129 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
ZC3H6P61129 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC36.89■■■■□ 3.5
ZC3H6P61129 MIR4449-201ENST00000578365 66 ntBASIC36.89■■■■□ 3.5
ZC3H6P61129 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
ZC3H6P61129 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.85■■■■□ 3.49
ZC3H6P61129 MIR639-201ENST00000384974 98 ntBASIC36.81■■■■□ 3.48
ZC3H6P61129 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC36.79■■■■□ 3.48
ZC3H6P61129 CIB2-204ENST00000557846 934 ntTSL 3 BASIC36.78■■■■□ 3.48
ZC3H6P61129 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
ZC3H6P61129 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
ZC3H6P61129 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC36.75■■■■□ 3.47
ZC3H6P61129 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC36.75■■■■□ 3.47
ZC3H6P61129 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
ZC3H6P61129 MACF1-219ENST00000484793 834 ntTSL 2 BASIC36.75■■■■□ 3.47
ZC3H6P61129 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
ZC3H6P61129 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
ZC3H6P61129 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
ZC3H6P61129 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC36.72■■■■□ 3.47
ZC3H6P61129 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
ZC3H6P61129 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC36.71■■■■□ 3.47
ZC3H6P61129 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
ZC3H6P61129 MIR6090-201ENST00000622481 60 ntBASIC36.7■■■■□ 3.47
ZC3H6P61129 RNF166-209ENST00000567844 633 ntTSL 5 BASIC36.69■■■■□ 3.46
ZC3H6P61129 AC016575.1-201ENST00000607026 382 ntBASIC36.69■■■■□ 3.46
ZC3H6P61129 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
ZC3H6P61129 MIR3648-2-201ENST00000581792 180 ntBASIC36.67■■■■□ 3.46
ZC3H6P61129 MIR3648-1-201ENST00000615959 180 ntBASIC36.67■■■■□ 3.46
ZC3H6P61129 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ZC3H6P61129 GDI1-215ENST00000630693 786 ntTSL 4 BASIC36.65■■■■□ 3.46
ZC3H6P61129 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.65■■■■□ 3.46
ZC3H6P61129 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.63■■■■□ 3.45
ZC3H6P61129 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC36.62■■■■□ 3.45
ZC3H6P61129 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ZC3H6P61129 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC36.6■■■■□ 3.45
ZC3H6P61129 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ZC3H6P61129 AC108673.1-201ENST00000510422 1159 ntBASIC36.6■■■■□ 3.45
ZC3H6P61129 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC36.6■■■■□ 3.45
ZC3H6P61129 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ZC3H6P61129 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC36.59■■■■□ 3.45
ZC3H6P61129 CALM3-209ENST00000597743 577 ntTSL 4 BASIC36.58■■■■□ 3.45
ZC3H6P61129 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC36.57■■■■□ 3.44
ZC3H6P61129 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
ZC3H6P61129 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC36.57■■■■□ 3.44
ZC3H6P61129 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms