Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.371e-7■■■■■ 38.5
NCBP2P52298 MED16-211ENST00000606828 599 ntTSL 1 (best)12.57□□□□□ -0.41e-7■■■■■ 38.5
NCBP2P52298 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.41e-7■■■■■ 38.5
NCBP2P52298 METTL12-204ENST00000594728 376 nt5.31□□□□□ -1.569e-17■■■■■ 37.9
NCBP2P52298 ZFAS1-207ENST00000458653 596 ntTSL 226.11■■□□□ 1.771e-36■■■■■ 37.8
NCBP2P52298 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)22.98■■□□□ 1.271e-36■■■■■ 37.8
NCBP2P52298 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)21.67■■□□□ 1.061e-36■■■■■ 37.8
NCBP2P52298 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.07■□□□□ 0.81e-36■■■■■ 37.8
NCBP2P52298 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)20.07■□□□□ 0.81e-36■■■■■ 37.8
NCBP2P52298 TMEM183A-205ENST00000543891 924 ntTSL 319.36■□□□□ 0.695e-10■■■■■ 37.8
NCBP2P52298 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.265e-10■■■■■ 37.8
NCBP2P52298 ZFAS1-209ENST00000620594 508 ntTSL 37.05□□□□□ -1.281e-36■■■■■ 37.8
NCBP2P52298 ZFAS1-204ENST00000428008 566 ntTSL 26.38□□□□□ -1.391e-36■■■■■ 37.8
NCBP2P52298 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)6.34□□□□□ -1.391e-36■■■■■ 37.8
NCBP2P52298 PPFIBP1-213ENST00000541633 574 ntTSL 419.7■□□□□ 0.746e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.22□□□□□ -0.136e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-210ENST00000540114 2645 ntTSL 214□□□□□ -0.176e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.09□□□□□ -0.316e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.79□□□□□ -0.366e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-217ENST00000545381 1191 ntTSL 1 (best)8.52□□□□□ -1.056e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.26□□□□□ -1.096e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.99□□□□□ -1.296e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.496e-10■■■■■ 37.7
NCBP2P52298 PPFIBP1-208ENST00000538433 609 ntTSL 32.1□□□□□ -2.076e-10■■■■■ 37.7
NCBP2P52298 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.25■□□□□ 0.191e-7■■■■■ 37.4
NCBP2P52298 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.85■□□□□ 0.131e-7■■■■■ 37.4
NCBP2P52298 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 01e-7■■■■■ 37.4
NCBP2P52298 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.77□□□□□ -0.051e-7■■■■■ 37.4
NCBP2P52298 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.77□□□□□ -0.051e-7■■■■■ 37.4
NCBP2P52298 CENPM-207ENST00000460824 303 ntTSL 313.61□□□□□ -0.231e-7■■■■■ 37.4
NCBP2P52298 CENPM-202ENST00000396437 689 ntTSL 310.29□□□□□ -0.761e-7■■■■■ 37.4
NCBP2P52298 LZTR1-215ENST00000493460 412 ntTSL 323.36■■□□□ 1.335e-11■■■■■ 37.3
NCBP2P52298 LZTR1-202ENST00000414985 872 ntTSL 520.1■□□□□ 0.815e-11■■■■■ 37.3
NCBP2P52298 LZTR1-206ENST00000443265 698 ntTSL 519.01■□□□□ 0.635e-11■■■■■ 37.3
NCBP2P52298 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.055e-11■■■■■ 37.3
NCBP2P52298 LZTR1-211ENST00000479606 3442 ntTSL 212.82□□□□□ -0.365e-11■■■■■ 37.3
NCBP2P52298 SHOC2-205ENST00000489390 815 ntTSL 512.43□□□□□ -0.429e-10■■■■■ 37.3
NCBP2P52298 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.449e-10■■■■■ 37.3
NCBP2P52298 SHOC2-204ENST00000480155 650 ntTSL 21.83□□□□□ -2.129e-10■■■■■ 37.3
NCBP2P52298 SMC6-210ENST00000621152 500 ntTSL 318.71■□□□□ 0.596e-13■■■■■ 37.3
NCBP2P52298 SMC6-206ENST00000446852 2460 ntTSL 1 (best)16.52■□□□□ 0.236e-13■■■■■ 37.3
NCBP2P52298 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.276e-13■■■■■ 37.3
NCBP2P52298 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.026e-13■■■■■ 37.3
NCBP2P52298 SMC6-204ENST00000428868 544 ntTSL 48.35□□□□□ -1.076e-13■■■■■ 37.3
NCBP2P52298 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.756e-13■■■■■ 37.3
NCBP2P52298 UBA2-210ENST00000607361 754 ntTSL 222.72■■□□□ 1.232e-6■■■■■ 37
NCBP2P52298 UBA2-203ENST00000586313 1458 ntTSL 219.09■□□□□ 0.652e-6■■■■■ 37
NCBP2P52298 UBA2-205ENST00000590048 847 ntTSL 313.77□□□□□ -0.212e-6■■■■■ 37
NCBP2P52298 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.342e-6■■■■■ 37
NCBP2P52298 UBA2-209ENST00000592841 344 ntTSL 21.98□□□□□ -2.092e-6■■■■■ 37
NCBP2P52298 UTP4-211ENST00000567460 595 ntTSL 420.61■□□□□ 0.899e-10■■■■■ 36.8
NCBP2P52298 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.589e-10■■■■■ 36.8
NCBP2P52298 UTP4-203ENST00000562237 2186 ntTSL 1 (best)18.51■□□□□ 0.559e-10■■■■■ 36.8
NCBP2P52298 UTP4-207ENST00000566227 747 ntTSL 39.54□□□□□ -0.889e-10■■■■■ 36.8
NCBP2P52298 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC8.85□□□□□ -0.999e-10■■■■■ 36.8
NCBP2P52298 UTP4-205ENST00000563299 581 ntTSL 37.06□□□□□ -1.289e-10■■■■■ 36.8
NCBP2P52298 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.88□□□□□ -1.319e-10■■■■■ 36.8
NCBP2P52298 UTP4-216ENST00000569800 552 ntTSL 46.49□□□□□ -1.379e-10■■■■■ 36.8
NCBP2P52298 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.01■□□□□ 0.952e-9■■■■■ 36.8
NCBP2P52298 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.832e-9■■■■■ 36.8
NCBP2P52298 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.43■□□□□ 0.542e-9■■■■■ 36.8
NCBP2P52298 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.78■□□□□ 0.442e-9■■■■■ 36.8
NCBP2P52298 SPAG16-203ENST00000406979 2352 ntTSL 1 (best)17.25■□□□□ 0.352e-9■■■■■ 36.8
NCBP2P52298 SPAG16-208ENST00000440779 805 ntTSL 317.1■□□□□ 0.332e-9■■■■■ 36.8
NCBP2P52298 SPAG16-206ENST00000420497 514 ntTSL 517.1■□□□□ 0.332e-9■■■■■ 36.8
NCBP2P52298 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.52■□□□□ 0.242e-9■■■■■ 36.8
NCBP2P52298 SPAG16-211ENST00000452556 4751 ntTSL 28.42□□□□□ -1.062e-9■■■■■ 36.8
NCBP2P52298 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.056e-8■■■■■ 36.7
NCBP2P52298 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.026e-8■■■■■ 36.7
NCBP2P52298 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)4.48□□□□□ -1.696e-8■■■■■ 36.7
NCBP2P52298 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)3.59□□□□□ -1.836e-8■■■■■ 36.7
NCBP2P52298 CCNL1-224ENST00000483789 667 ntTSL 22.96□□□□□ -1.946e-8■■■■■ 36.7
NCBP2P52298 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)2.46□□□□□ -2.026e-8■■■■■ 36.7
NCBP2P52298 CCNL1-221ENST00000479052 458 ntTSL 32.45□□□□□ -2.026e-8■■■■■ 36.7
NCBP2P52298 CCNL1-220ENST00000478454 580 ntTSL 42.14□□□□□ -2.076e-8■■■■■ 36.7
NCBP2P52298 SERPINA1-215ENST00000556955 571 ntTSL 412.84□□□□□ -0.357e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.377e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-217ENST00000557118 583 ntTSL 412.65□□□□□ -0.387e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.57e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.517e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-219ENST00000557492 951 ntTSL 411.56□□□□□ -0.567e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.577e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-214ENST00000556091 643 ntTSL 311.27□□□□□ -0.617e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-213ENST00000555289 609 ntTSL 511.07□□□□□ -0.647e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-204ENST00000402629 1450 ntTSL 1 (best) BASIC10.95□□□□□ -0.667e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.697e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-211ENST00000553327 581 ntTSL 310.23□□□□□ -0.777e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.937e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.957e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.077e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.227e-18■■■■■ 36.5
NCBP2P52298 SERPINA1-212ENST00000554720 446 ntTSL 56.58□□□□□ -1.367e-18■■■■■ 36.5
NCBP2P52298 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.716e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-210ENST00000469193 647 ntTSL 321.89■■□□□ 1.099e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-204ENST00000460560 2111 ntTSL 517.6■□□□□ 0.419e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-208ENST00000464865 1228 ntTSL 215.35■□□□□ 0.059e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.39e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC11.77□□□□□ -0.539e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-222ENST00000490760 574 ntTSL 510.84□□□□□ -0.679e-10■■■■■ 36.4
NCBP2P52298 SLC37A3-215ENST00000477571 3488 ntTSL 59.46□□□□□ -0.99e-10■■■■■ 36.4
Retrieved 100 of 18,329 protein–RNA pairs in 390.7 ms