RNA–Protein interactions for RNA: ENST00000562237.5

UTP4-203, Transcript of UTP4, small subunit processome component, humanhuman

TSL 1 (best)

Gene UTP4, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-203ENST00000562237 NISCHQ9Y2I1 1504 aa40.63■■■■■ 4.1
UTP4-203ENST00000562237 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
UTP4-203ENST00000562237 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
UTP4-203ENST00000562237 SHROOM4Q9ULL8 1493 aa34.44■■■■□ 3.1
UTP4-203ENST00000562237 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
UTP4-203ENST00000562237 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
UTP4-203ENST00000562237 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
UTP4-203ENST00000562237 CHIC1Q5VXU3 224 aa33.19■■■□□ 2.9
UTP4-203ENST00000562237 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
UTP4-203ENST00000562237 ABCC9O60706 1549 aa32.53■■■□□ 2.8
UTP4-203ENST00000562237 HRCP23327 699 aa32.48■■■□□ 2.79
UTP4-203ENST00000562237 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
UTP4-203ENST00000562237 PCGF6Q9BYE7 350 aa32.2■■■□□ 2.75
UTP4-203ENST00000562237 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
UTP4-203ENST00000562237 LOC105371045A0A1W2PR82 267 aa32.08■■■□□ 2.73
UTP4-203ENST00000562237 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
UTP4-203ENST00000562237 NACADO15069 1562 aa31.88■■■□□ 2.69
UTP4-203ENST00000562237 TRIM26Q12899 539 aaPredicted RBP31.7■■■□□ 2.67
UTP4-203ENST00000562237 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
UTP4-203ENST00000562237 PPARGC1BQ86YN6 1023 aaKnown RBP31.6■■■□□ 2.65
UTP4-203ENST00000562237 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
UTP4-203ENST00000562237 MROH2BQ7Z745 1585 aa31.54■■■□□ 2.64
UTP4-203ENST00000562237 WIZO95785 1651 aa31.39■■■□□ 2.62
UTP4-203ENST00000562237 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
UTP4-203ENST00000562237 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
UTP4-203ENST00000562237 EIF4G1Q04637 1599 aaKnown RBP31.18■■■□□ 2.58
UTP4-203ENST00000562237 ZEB1P37275 1124 aaPredicted RBP31.16■■■□□ 2.58
UTP4-203ENST00000562237 TOP2AP11388 1531 aaKnown RBP30.97■■■□□ 2.55
UTP4-203ENST00000562237 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
UTP4-203ENST00000562237 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
UTP4-203ENST00000562237 EHMT2Q96KQ7 1210 aa30.81■■■□□ 2.52
UTP4-203ENST00000562237 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
UTP4-203ENST00000562237 CCDC88BA6NC98 1476 aa30.77■■■□□ 2.52
UTP4-203ENST00000562237 ABCC8Q09428 1581 aa30.68■■■□□ 2.5
UTP4-203ENST00000562237 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
UTP4-203ENST00000562237 EEA1Q15075 1411 aa30.47■■■□□ 2.47
UTP4-203ENST00000562237 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
UTP4-203ENST00000562237 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
UTP4-203ENST00000562237 SOGA1O94964 1423 aa30.42■■■□□ 2.46
UTP4-203ENST00000562237 TNIKQ9UKE5 1360 aa30.42■■■□□ 2.46
UTP4-203ENST00000562237 CEP162Q5TB80 1403 aa30.41■■■□□ 2.46
UTP4-203ENST00000562237 CSRNP3Q8WYN3 585 aa30.28■■■□□ 2.44
UTP4-203ENST00000562237 RUSC2Q8N2Y8 1516 aa30.26■■■□□ 2.43
UTP4-203ENST00000562237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.25■■■□□ 2.43
UTP4-203ENST00000562237 CCER1Q8TC90 406 aaPredicted RBP30.22■■■□□ 2.43
UTP4-203ENST00000562237 GOLGA3Q08378 1498 aa30.2■■■□□ 2.42
UTP4-203ENST00000562237 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
UTP4-203ENST00000562237 SYNJ1O43426 1573 aa30.08■■■□□ 2.41
UTP4-203ENST00000562237 KIF21BO75037 1637 aa30.07■■■□□ 2.4
UTP4-203ENST00000562237 UBTFP17480 764 aaKnown RBP30.05■■■□□ 2.4
UTP4-203ENST00000562237 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
UTP4-203ENST00000562237 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
UTP4-203ENST00000562237 SCAF1Q9H7N4 1312 aaKnown RBP29.96■■■□□ 2.39
UTP4-203ENST00000562237 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
UTP4-203ENST00000562237 TTBK1Q5TCY1 1321 aaPredicted RBP29.9■■■□□ 2.38
UTP4-203ENST00000562237 CLIP1P30622 1438 aa29.8■■■□□ 2.36
UTP4-203ENST00000562237 DIEXFQ68CQ4 756 aaKnown RBP29.77■■■□□ 2.36
UTP4-203ENST00000562237 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
UTP4-203ENST00000562237 VPS8Q8N3P4 1428 aa29.75■■■□□ 2.35
UTP4-203ENST00000562237 RAPGEF2Q9Y4G8 1499 aa29.7■■■□□ 2.35
UTP4-203ENST00000562237 BIVM-ERCC5R4GMW8 1640 aa29.69■■■□□ 2.34
UTP4-203ENST00000562237 PELP1Q8IZL8 1130 aaKnown RBP29.69■■■□□ 2.34
UTP4-203ENST00000562237 ACIN1Q9UKV3 1341 aaKnown RBP29.68■■■□□ 2.34
UTP4-203ENST00000562237 NEUROD1Q13562 356 aa29.57■■■□□ 2.32
UTP4-203ENST00000562237 ZNF316A6NFI3 1004 aaPredicted RBP29.56■■■□□ 2.32
UTP4-203ENST00000562237 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
UTP4-203ENST00000562237 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
UTP4-203ENST00000562237 PRXQ9BXM0 1461 aa29.49■■■□□ 2.31
UTP4-203ENST00000562237 CENPBP07199 599 aaPredicted RBP29.49■■■□□ 2.31
UTP4-203ENST00000562237 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
UTP4-203ENST00000562237 APLP2Q06481 763 aa29.46■■■□□ 2.31
UTP4-203ENST00000562237 HNRNPUL2Q1KMD3 747 aaKnown RBP29.46■■■□□ 2.31
UTP4-203ENST00000562237 CUX1P39880 1505 aa29.37■■■□□ 2.29
UTP4-203ENST00000562237 ARAP1Q96P48 1450 aa29.35■■■□□ 2.29
UTP4-203ENST00000562237 CFTRP13569 1480 aa29.27■■■□□ 2.28
UTP4-203ENST00000562237 GTF3C3Q9Y5Q9 886 aa29.26■■■□□ 2.28
UTP4-203ENST00000562237 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
UTP4-203ENST00000562237 RANGAP1P46060 587 aaPredicted RBP29.23■■■□□ 2.27
UTP4-203ENST00000562237 CLSPNQ9HAW4 1339 aa29.22■■■□□ 2.27
UTP4-203ENST00000562237 PRDM2Q13029 1718 aa29.19■■■□□ 2.26
UTP4-203ENST00000562237 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
UTP4-203ENST00000562237 DHX57Q6P158 1386 aaKnown RBP29.11■■■□□ 2.25
UTP4-203ENST00000562237 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
UTP4-203ENST00000562237 MIER1Q8N108 512 aa29.09■■■□□ 2.25
UTP4-203ENST00000562237 ARHGAP35Q9NRY4 1499 aa29.06■■■□□ 2.24
UTP4-203ENST00000562237 CUX2O14529 1486 aa29.04■■■□□ 2.24
UTP4-203ENST00000562237 IGF1RP08069 1367 aa28.91■■■□□ 2.22
UTP4-203ENST00000562237 CCNB3Q8WWL7 1395 aa28.91■■■□□ 2.22
UTP4-203ENST00000562237 MAP3K1Q13233 1512 aa28.91■■■□□ 2.22
UTP4-203ENST00000562237 YTHDC1Q96MU7 727 aaKnown RBP28.91■■■□□ 2.22
UTP4-203ENST00000562237 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
UTP4-203ENST00000562237 TIAM1Q13009 1591 aa28.82■■■□□ 2.2
UTP4-203ENST00000562237 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
UTP4-203ENST00000562237 CARMIL1Q5VZK9 1371 aa28.77■■■□□ 2.2
UTP4-203ENST00000562237 LRRC9Q6ZRR7 1453 aa28.68■■■□□ 2.18
UTP4-203ENST00000562237 CFAP43Q8NDM7 1665 aa28.66■■■□□ 2.18
UTP4-203ENST00000562237 FHAD1B1AJZ9 1412 aa28.64■■■□□ 2.17
UTP4-203ENST00000562237 RAB3GAP2Q9H2M9 1393 aa28.64■■■□□ 2.17
UTP4-203ENST00000562237 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
UTP4-203ENST00000562237 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms