RNA–Protein interactions for RNA: ENST00000592841.5

UBA2-209, Transcript of ubiquitin like modifier activating enzyme 2, humanhuman

TSL 2

Gene UBA2, Length 344 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA2-209ENST00000592841 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
UBA2-209ENST00000592841 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
UBA2-209ENST00000592841 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
UBA2-209ENST00000592841 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
UBA2-209ENST00000592841 FOXD1Q16676 465 aa18.86■□□□□ 0.61
UBA2-209ENST00000592841 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
UBA2-209ENST00000592841 MSH5O43196 834 aa17.74■□□□□ 0.43
UBA2-209ENST00000592841 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
UBA2-209ENST00000592841 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
UBA2-209ENST00000592841 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
UBA2-209ENST00000592841 ADRA2BP18089 450 aa17.32■□□□□ 0.36
UBA2-209ENST00000592841 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
UBA2-209ENST00000592841 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
UBA2-209ENST00000592841 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
UBA2-209ENST00000592841 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
UBA2-209ENST00000592841 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
UBA2-209ENST00000592841 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
UBA2-209ENST00000592841 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
UBA2-209ENST00000592841 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
UBA2-209ENST00000592841 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
UBA2-209ENST00000592841 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
UBA2-209ENST00000592841 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
UBA2-209ENST00000592841 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
UBA2-209ENST00000592841 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
UBA2-209ENST00000592841 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
UBA2-209ENST00000592841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.093e-10■□□□□ 9.2
UBA2-209ENST00000592841 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
UBA2-209ENST00000592841 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
UBA2-209ENST00000592841 DSG3P32926 999 aa14.07□□□□□ -0.16
UBA2-209ENST00000592841 KCNA4P22459 653 aa14.01□□□□□ -0.17
UBA2-209ENST00000592841 CAPN15O75808 1086 aa14□□□□□ -0.17
UBA2-209ENST00000592841 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
UBA2-209ENST00000592841 POTEHQ6S545 545 aa13.84□□□□□ -0.19
UBA2-209ENST00000592841 APLP2Q06481 763 aa13.75□□□□□ -0.21
UBA2-209ENST00000592841 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
UBA2-209ENST00000592841 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
UBA2-209ENST00000592841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
UBA2-209ENST00000592841 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
UBA2-209ENST00000592841 ABCB7O75027 752 aa13.68□□□□□ -0.22
UBA2-209ENST00000592841 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
UBA2-209ENST00000592841 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
UBA2-209ENST00000592841 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
UBA2-209ENST00000592841 POLA2Q14181 598 aa13.33□□□□□ -0.28
UBA2-209ENST00000592841 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
UBA2-209ENST00000592841 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
UBA2-209ENST00000592841 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
UBA2-209ENST00000592841 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
UBA2-209ENST00000592841 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
UBA2-209ENST00000592841 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
UBA2-209ENST00000592841 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
UBA2-209ENST00000592841 ZBTB22O15209 634 aa12.93□□□□□ -0.34
UBA2-209ENST00000592841 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
UBA2-209ENST00000592841 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
UBA2-209ENST00000592841 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
UBA2-209ENST00000592841 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
UBA2-209ENST00000592841 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
UBA2-209ENST00000592841 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.372e-8■■■□□ 18.3
UBA2-209ENST00000592841 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
UBA2-209ENST00000592841 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
UBA2-209ENST00000592841 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
UBA2-209ENST00000592841 HAX1O00165 279 aa12.62□□□□□ -0.39
UBA2-209ENST00000592841 FBLN2P98095 1184 aa12.59□□□□□ -0.39
UBA2-209ENST00000592841 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
UBA2-209ENST00000592841 EVX2Q03828 476 aa12.52□□□□□ -0.41
UBA2-209ENST00000592841 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
UBA2-209ENST00000592841 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
UBA2-209ENST00000592841 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
UBA2-209ENST00000592841 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
UBA2-209ENST00000592841 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
UBA2-209ENST00000592841 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
UBA2-209ENST00000592841 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
UBA2-209ENST00000592841 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBA2-209ENST00000592841 GABBR2O75899 941 aa12.21□□□□□ -0.45
UBA2-209ENST00000592841 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
UBA2-209ENST00000592841 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
UBA2-209ENST00000592841 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
UBA2-209ENST00000592841 LHX8Q68G74 356 aa12.04□□□□□ -0.48
UBA2-209ENST00000592841 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
UBA2-209ENST00000592841 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
UBA2-209ENST00000592841 CLCN6P51797 869 aa11.96□□□□□ -0.49
UBA2-209ENST00000592841 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
UBA2-209ENST00000592841 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
UBA2-209ENST00000592841 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
UBA2-209ENST00000592841 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
UBA2-209ENST00000592841 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.53
UBA2-209ENST00000592841 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
UBA2-209ENST00000592841 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
UBA2-209ENST00000592841 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
UBA2-209ENST00000592841 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
UBA2-209ENST00000592841 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
UBA2-209ENST00000592841 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
UBA2-209ENST00000592841 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBA2-209ENST00000592841 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
UBA2-209ENST00000592841 PROM2Q8N271 834 aa11.58□□□□□ -0.56
UBA2-209ENST00000592841 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
UBA2-209ENST00000592841 PELP1Q8IZL8 1130 aaKnown RBP11.54□□□□□ -0.56
UBA2-209ENST00000592841 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
UBA2-209ENST00000592841 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
UBA2-209ENST00000592841 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
UBA2-209ENST00000592841 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms