Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
ATP6V1AP38606 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
ATP6V1AP38606 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC35.51■■■■□ 3.27
ATP6V1AP38606 WASH5P-204ENST00000632292 975 ntBASIC35.49■■■■□ 3.27
ATP6V1AP38606 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
ATP6V1AP38606 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.48■■■■□ 3.27
ATP6V1AP38606 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.46■■■■□ 3.27
ATP6V1AP38606 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC35.45■■■■□ 3.27
ATP6V1AP38606 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
ATP6V1AP38606 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
ATP6V1AP38606 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
ATP6V1AP38606 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
ATP6V1AP38606 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
ATP6V1AP38606 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.41■■■■□ 3.26
ATP6V1AP38606 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
ATP6V1AP38606 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
ATP6V1AP38606 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.39■■■■□ 3.26
ATP6V1AP38606 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC35.39■■■■□ 3.26
ATP6V1AP38606 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.38■■■■□ 3.25
ATP6V1AP38606 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.38■■■■□ 3.25
ATP6V1AP38606 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
ATP6V1AP38606 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
ATP6V1AP38606 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ATP6V1AP38606 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
ATP6V1AP38606 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
ATP6V1AP38606 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.32■■■■□ 3.24
ATP6V1AP38606 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.31■■■■□ 3.24
ATP6V1AP38606 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.3■■■■□ 3.24
ATP6V1AP38606 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
ATP6V1AP38606 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.3■■■■□ 3.24
ATP6V1AP38606 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
ATP6V1AP38606 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
ATP6V1AP38606 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
ATP6V1AP38606 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
ATP6V1AP38606 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
ATP6V1AP38606 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
ATP6V1AP38606 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC35.23■■■■□ 3.23
ATP6V1AP38606 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
ATP6V1AP38606 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.23■■■■□ 3.23
ATP6V1AP38606 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
ATP6V1AP38606 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
ATP6V1AP38606 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC35.22■■■■□ 3.23
ATP6V1AP38606 DUX4L29-201ENST00000425409 679 ntBASIC35.21■■■■□ 3.23
ATP6V1AP38606 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.21■■■■□ 3.23
ATP6V1AP38606 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
ATP6V1AP38606 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
ATP6V1AP38606 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
ATP6V1AP38606 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
ATP6V1AP38606 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC35.17■■■■□ 3.22
ATP6V1AP38606 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
ATP6V1AP38606 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
ATP6V1AP38606 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
ATP6V1AP38606 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.15■■■■□ 3.22
ATP6V1AP38606 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
ATP6V1AP38606 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
ATP6V1AP38606 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC35.13■■■■□ 3.21
ATP6V1AP38606 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC35.12■■■■□ 3.21
ATP6V1AP38606 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC35.11■■■■□ 3.21
ATP6V1AP38606 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC35.11■■■■□ 3.21
ATP6V1AP38606 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.1■■■■□ 3.21
ATP6V1AP38606 AC021231.2-201ENST00000594613 730 ntBASIC35.09■■■■□ 3.21
ATP6V1AP38606 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
ATP6V1AP38606 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
ATP6V1AP38606 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC35.06■■■■□ 3.2
ATP6V1AP38606 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
ATP6V1AP38606 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC35.06■■■■□ 3.2
ATP6V1AP38606 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
ATP6V1AP38606 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
ATP6V1AP38606 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
ATP6V1AP38606 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
ATP6V1AP38606 CIB2-204ENST00000557846 934 ntTSL 3 BASIC35■■■■□ 3.19
ATP6V1AP38606 MIR4449-201ENST00000578365 66 ntBASIC35■■■■□ 3.19
ATP6V1AP38606 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
ATP6V1AP38606 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
ATP6V1AP38606 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC34.97■■■■□ 3.19
ATP6V1AP38606 MIR639-201ENST00000384974 98 ntBASIC34.96■■■■□ 3.19
ATP6V1AP38606 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.95■■■■□ 3.19
ATP6V1AP38606 MACF1-219ENST00000484793 834 ntTSL 2 BASIC34.94■■■■□ 3.18
ATP6V1AP38606 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
ATP6V1AP38606 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ATP6V1AP38606 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ATP6V1AP38606 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
ATP6V1AP38606 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ATP6V1AP38606 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.91■■■■□ 3.18
ATP6V1AP38606 MIR6090-201ENST00000622481 60 ntBASIC34.91■■■■□ 3.18
ATP6V1AP38606 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC34.9■■■■□ 3.18
ATP6V1AP38606 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
ATP6V1AP38606 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC34.89■■■■□ 3.18
ATP6V1AP38606 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ATP6V1AP38606 AC108673.1-201ENST00000510422 1159 ntBASIC34.87■■■■□ 3.17
ATP6V1AP38606 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.86■■■■□ 3.17
ATP6V1AP38606 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC34.86■■■■□ 3.17
ATP6V1AP38606 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC34.86■■■■□ 3.17
ATP6V1AP38606 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
ATP6V1AP38606 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
ATP6V1AP38606 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
ATP6V1AP38606 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
ATP6V1AP38606 MIR3648-2-201ENST00000581792 180 ntBASIC34.83■■■■□ 3.17
ATP6V1AP38606 AC016575.1-201ENST00000607026 382 ntBASIC34.83■■■■□ 3.17
ATP6V1AP38606 MIR3648-1-201ENST00000615959 180 ntBASIC34.83■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms