Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.73■■■□□ 2.67
CALM3P0DP25 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
CALM3P0DP25 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CALM3P0DP25 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.7■■■□□ 2.67
CALM3P0DP25 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CALM3P0DP25 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CALM3P0DP25 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CALM3P0DP25 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.68■■■□□ 2.66
CALM3P0DP25 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CALM3P0DP25 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.67■■■□□ 2.66
CALM3P0DP25 CAHM-201ENST00000604200 896 ntBASIC31.65■■■□□ 2.66
CALM3P0DP25 AL391121.1-201ENST00000607967 1349 ntBASIC31.65■■■□□ 2.66
CALM3P0DP25 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CALM3P0DP25 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
CALM3P0DP25 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CALM3P0DP25 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CALM3P0DP25 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CALM3P0DP25 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CALM3P0DP25 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CALM3P0DP25 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CALM3P0DP25 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CALM3P0DP25 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CALM3P0DP25 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
CALM3P0DP25 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CALM3P0DP25 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.58■■■□□ 2.65
CALM3P0DP25 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CALM3P0DP25 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.56■■■□□ 2.64
CALM3P0DP25 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.55■■■□□ 2.64
CALM3P0DP25 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CALM3P0DP25 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.54■■■□□ 2.64
CALM3P0DP25 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CALM3P0DP25 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.54■■■□□ 2.64
CALM3P0DP25 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CALM3P0DP25 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CALM3P0DP25 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CALM3P0DP25 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CALM3P0DP25 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CALM3P0DP25 SUZ12P1-203ENST00000578195 985 ntBASIC31.49■■■□□ 2.63
CALM3P0DP25 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CALM3P0DP25 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CALM3P0DP25 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CALM3P0DP25 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.46■■■□□ 2.63
CALM3P0DP25 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CALM3P0DP25 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CALM3P0DP25 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CALM3P0DP25 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
CALM3P0DP25 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.42■■■□□ 2.62
CALM3P0DP25 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
CALM3P0DP25 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.41■■■□□ 2.62
CALM3P0DP25 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CALM3P0DP25 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.37■■■□□ 2.61
CALM3P0DP25 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CALM3P0DP25 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.37■■■□□ 2.61
CALM3P0DP25 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CALM3P0DP25 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.35■■■□□ 2.61
CALM3P0DP25 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CALM3P0DP25 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CALM3P0DP25 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CALM3P0DP25 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CALM3P0DP25 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.33■■■□□ 2.61
CALM3P0DP25 AL161658.1-201ENST00000623641 1967 ntBASIC31.32■■■□□ 2.6
CALM3P0DP25 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CALM3P0DP25 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CALM3P0DP25 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CALM3P0DP25 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.29■■■□□ 2.6
CALM3P0DP25 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.28■■■□□ 2.6
CALM3P0DP25 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CALM3P0DP25 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CALM3P0DP25 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CALM3P0DP25 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CALM3P0DP25 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.27■■■□□ 2.6
CALM3P0DP25 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CALM3P0DP25 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CALM3P0DP25 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.26■■■□□ 2.59
CALM3P0DP25 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CALM3P0DP25 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CALM3P0DP25 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CALM3P0DP25 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CALM3P0DP25 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CALM3P0DP25 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CALM3P0DP25 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CALM3P0DP25 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.24■■■□□ 2.59
CALM3P0DP25 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CALM3P0DP25 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CALM3P0DP25 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.22■■■□□ 2.59
CALM3P0DP25 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CALM3P0DP25 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.21■■■□□ 2.59
CALM3P0DP25 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CALM3P0DP25 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CALM3P0DP25 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CALM3P0DP25 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.21■■■□□ 2.59
CALM3P0DP25 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CALM3P0DP25 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CALM3P0DP25 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CALM3P0DP25 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CALM3P0DP25 MIR762-201ENST00000390236 83 ntBASIC31.19■■■□□ 2.58
CALM3P0DP25 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.19■■■□□ 2.58
CALM3P0DP25 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CALM3P0DP25 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CALM3P0DP25 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms