Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
COL5A2P05997 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC36.94■■■■□ 3.5
COL5A2P05997 HGH1-207ENST00000628266 258 ntTSL 5 BASIC36.94■■■■□ 3.5
COL5A2P05997 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC36.94■■■■□ 3.5
COL5A2P05997 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC36.93■■■■□ 3.5
COL5A2P05997 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
COL5A2P05997 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC36.93■■■■□ 3.5
COL5A2P05997 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC36.91■■■■□ 3.5
COL5A2P05997 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
COL5A2P05997 WASH5P-204ENST00000632292 975 ntBASIC36.91■■■■□ 3.5
COL5A2P05997 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
COL5A2P05997 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC36.89■■■■□ 3.5
COL5A2P05997 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC36.88■■■■□ 3.5
COL5A2P05997 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC36.88■■■■□ 3.49
COL5A2P05997 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
COL5A2P05997 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC36.87■■■■□ 3.49
COL5A2P05997 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
COL5A2P05997 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
COL5A2P05997 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
COL5A2P05997 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC36.83■■■■□ 3.49
COL5A2P05997 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC36.82■■■■□ 3.49
COL5A2P05997 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
COL5A2P05997 RPS2-209ENST00000529806 993 ntTSL 3 BASIC36.82■■■■□ 3.48
COL5A2P05997 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC36.82■■■■□ 3.48
COL5A2P05997 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC36.81■■■■□ 3.48
COL5A2P05997 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
COL5A2P05997 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
COL5A2P05997 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC36.81■■■■□ 3.48
COL5A2P05997 RPS2-202ENST00000526522 924 ntTSL 2 BASIC36.81■■■■□ 3.48
COL5A2P05997 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
COL5A2P05997 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
COL5A2P05997 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
COL5A2P05997 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC36.73■■■■□ 3.47
COL5A2P05997 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
COL5A2P05997 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
COL5A2P05997 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC36.69■■■■□ 3.46
COL5A2P05997 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC36.69■■■■□ 3.46
COL5A2P05997 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
COL5A2P05997 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
COL5A2P05997 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC36.68■■■■□ 3.46
COL5A2P05997 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC36.68■■■■□ 3.46
COL5A2P05997 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
COL5A2P05997 MIR4449-201ENST00000578365 66 ntBASIC36.66■■■■□ 3.46
COL5A2P05997 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC36.65■■■■□ 3.46
COL5A2P05997 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
COL5A2P05997 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
COL5A2P05997 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
COL5A2P05997 DUX4L29-201ENST00000425409 679 ntBASIC36.63■■■■□ 3.45
COL5A2P05997 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
COL5A2P05997 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
COL5A2P05997 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC36.61■■■■□ 3.45
COL5A2P05997 MACF1-219ENST00000484793 834 ntTSL 2 BASIC36.6■■■■□ 3.45
COL5A2P05997 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
COL5A2P05997 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
COL5A2P05997 AC021231.2-201ENST00000594613 730 ntBASIC36.56■■■■□ 3.44
COL5A2P05997 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
COL5A2P05997 MIR639-201ENST00000384974 98 ntBASIC36.53■■■■□ 3.44
COL5A2P05997 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
COL5A2P05997 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC36.53■■■■□ 3.44
COL5A2P05997 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
COL5A2P05997 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
COL5A2P05997 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC36.47■■■■□ 3.43
COL5A2P05997 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
COL5A2P05997 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC36.46■■■■□ 3.43
COL5A2P05997 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
COL5A2P05997 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC36.45■■■■□ 3.43
COL5A2P05997 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
COL5A2P05997 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
COL5A2P05997 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC36.44■■■■□ 3.42
COL5A2P05997 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC36.44■■■■□ 3.42
COL5A2P05997 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
COL5A2P05997 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
COL5A2P05997 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
COL5A2P05997 RNF166-209ENST00000567844 633 ntTSL 5 BASIC36.39■■■■□ 3.42
COL5A2P05997 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
COL5A2P05997 MIR3648-2-201ENST00000581792 180 ntBASIC36.36■■■■□ 3.41
COL5A2P05997 MIR3648-1-201ENST00000615959 180 ntBASIC36.36■■■■□ 3.41
COL5A2P05997 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
COL5A2P05997 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
COL5A2P05997 CIB2-204ENST00000557846 934 ntTSL 3 BASIC36.35■■■■□ 3.41
COL5A2P05997 AC016575.1-201ENST00000607026 382 ntBASIC36.34■■■■□ 3.41
COL5A2P05997 MIR6090-201ENST00000622481 60 ntBASIC36.33■■■■□ 3.41
COL5A2P05997 GDI1-215ENST00000630693 786 ntTSL 4 BASIC36.33■■■■□ 3.41
COL5A2P05997 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
COL5A2P05997 CR559946.2-201ENST00000623684 991 ntBASIC36.31■■■■□ 3.4
COL5A2P05997 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC36.3■■■■□ 3.4
COL5A2P05997 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
COL5A2P05997 HSD17B1P1-201ENST00000590052 955 ntBASIC36.3■■■■□ 3.4
COL5A2P05997 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC36.27■■■■□ 3.4
COL5A2P05997 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC36.27■■■■□ 3.4
COL5A2P05997 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC36.27■■■■□ 3.4
COL5A2P05997 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.27■■■■□ 3.4
COL5A2P05997 AC108673.1-201ENST00000510422 1159 ntBASIC36.26■■■■□ 3.4
COL5A2P05997 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
COL5A2P05997 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC36.26■■■■□ 3.39
COL5A2P05997 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC36.25■■■■□ 3.39
COL5A2P05997 CALM3-209ENST00000597743 577 ntTSL 4 BASIC36.24■■■■□ 3.39
COL5A2P05997 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC36.23■■■■□ 3.39
COL5A2P05997 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC36.23■■■■□ 3.39
COL5A2P05997 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms