Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.56■■■□□ 2.48
LGR5O75473 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
LGR5O75473 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LGR5O75473 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.55■■■□□ 2.48
LGR5O75473 MIR3665-201ENST00000578708 105 ntBASIC30.54■■■□□ 2.48
LGR5O75473 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
LGR5O75473 MIR762-201ENST00000390236 83 ntBASIC30.53■■■□□ 2.48
LGR5O75473 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.53■■■□□ 2.48
LGR5O75473 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.53■■■□□ 2.48
LGR5O75473 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.52■■■□□ 2.48
LGR5O75473 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
LGR5O75473 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LGR5O75473 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.48■■■□□ 2.47
LGR5O75473 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.48■■■□□ 2.47
LGR5O75473 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
LGR5O75473 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.47■■■□□ 2.47
LGR5O75473 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
LGR5O75473 DUX4L28-201ENST00000623687 678 ntBASIC30.46■■■□□ 2.47
LGR5O75473 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
LGR5O75473 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
LGR5O75473 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LGR5O75473 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LGR5O75473 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.43■■■□□ 2.46
LGR5O75473 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LGR5O75473 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
LGR5O75473 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LGR5O75473 AC087741.3-201ENST00000624270 1347 ntBASIC30.4■■■□□ 2.46
LGR5O75473 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.39■■■□□ 2.46
LGR5O75473 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
LGR5O75473 AC005559.1-201ENST00000589661 871 ntBASIC30.39■■■□□ 2.46
LGR5O75473 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
LGR5O75473 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
LGR5O75473 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LGR5O75473 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
LGR5O75473 ABHD17AP4-201ENST00000411545 909 ntBASIC30.36■■■□□ 2.45
LGR5O75473 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
LGR5O75473 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
LGR5O75473 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LGR5O75473 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.33■■■□□ 2.45
LGR5O75473 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LGR5O75473 MIR7108-201ENST00000614319 87 ntBASIC30.31■■■□□ 2.44
LGR5O75473 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LGR5O75473 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
LGR5O75473 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
LGR5O75473 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.28■■■□□ 2.44
LGR5O75473 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.27■■■□□ 2.44
LGR5O75473 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.27■■■□□ 2.44
LGR5O75473 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
LGR5O75473 AC044849.2-201ENST00000606596 710 ntBASIC30.27■■■□□ 2.44
LGR5O75473 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
LGR5O75473 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
LGR5O75473 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.27■■■□□ 2.44
LGR5O75473 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
LGR5O75473 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.24■■■□□ 2.43
LGR5O75473 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
LGR5O75473 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
LGR5O75473 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
LGR5O75473 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LGR5O75473 AC120057.4-201ENST00000624722 1615 ntBASIC30.22■■■□□ 2.43
LGR5O75473 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
LGR5O75473 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
LGR5O75473 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LGR5O75473 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LGR5O75473 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
LGR5O75473 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LGR5O75473 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LGR5O75473 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.17■■■□□ 2.42
LGR5O75473 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LGR5O75473 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.15■■■□□ 2.42
LGR5O75473 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.15■■■□□ 2.42
LGR5O75473 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.13■■■□□ 2.41
LGR5O75473 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
LGR5O75473 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
LGR5O75473 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
LGR5O75473 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.1■■■□□ 2.41
LGR5O75473 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
LGR5O75473 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.1■■■□□ 2.41
LGR5O75473 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
LGR5O75473 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.09■■■□□ 2.41
LGR5O75473 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
LGR5O75473 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
LGR5O75473 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.08■■■□□ 2.41
LGR5O75473 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LGR5O75473 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
LGR5O75473 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
LGR5O75473 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LGR5O75473 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LGR5O75473 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.06■■■□□ 2.4
LGR5O75473 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.05■■■□□ 2.4
LGR5O75473 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.04■■■□□ 2.4
LGR5O75473 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LGR5O75473 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LGR5O75473 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
LGR5O75473 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LGR5O75473 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LGR5O75473 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.02■■■□□ 2.4
LGR5O75473 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LGR5O75473 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LGR5O75473 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LGR5O75473 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms