Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 DUX4L29-201ENST00000425409 679 ntBASIC22.53■■□□□ 1.2
CRLF1O75462 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CRLF1O75462 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.5■■□□□ 1.19
CRLF1O75462 HSD17B1P1-201ENST00000590052 955 ntBASIC22.48■■□□□ 1.19
CRLF1O75462 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.48■■□□□ 1.19
CRLF1O75462 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CRLF1O75462 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.47■■□□□ 1.19
CRLF1O75462 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF1O75462 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF1O75462 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF1O75462 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.46■■□□□ 1.19
CRLF1O75462 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.45■■□□□ 1.18
CRLF1O75462 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CRLF1O75462 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.44■■□□□ 1.18
CRLF1O75462 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CRLF1O75462 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF1O75462 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF1O75462 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
CRLF1O75462 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.41■■□□□ 1.18
CRLF1O75462 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.39■■□□□ 1.17
CRLF1O75462 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.38■■□□□ 1.17
CRLF1O75462 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF1O75462 MIR3648-2-201ENST00000581792 180 ntBASIC22.36■■□□□ 1.17
CRLF1O75462 MIR3648-1-201ENST00000615959 180 ntBASIC22.36■■□□□ 1.17
CRLF1O75462 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CRLF1O75462 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CRLF1O75462 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CRLF1O75462 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.35■■□□□ 1.17
CRLF1O75462 AC021231.2-201ENST00000594613 730 ntBASIC22.35■■□□□ 1.17
CRLF1O75462 AC016575.1-201ENST00000607026 382 ntBASIC22.35■■□□□ 1.17
CRLF1O75462 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CRLF1O75462 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.34■■□□□ 1.17
CRLF1O75462 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CRLF1O75462 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.34■■□□□ 1.17
CRLF1O75462 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.34■■□□□ 1.17
CRLF1O75462 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.34■■□□□ 1.17
CRLF1O75462 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CRLF1O75462 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CRLF1O75462 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.33■■□□□ 1.17
CRLF1O75462 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CRLF1O75462 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CRLF1O75462 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CRLF1O75462 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.3■■□□□ 1.16
CRLF1O75462 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.28■■□□□ 1.16
CRLF1O75462 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.28■■□□□ 1.16
CRLF1O75462 WASH5P-204ENST00000632292 975 ntBASIC22.28■■□□□ 1.16
CRLF1O75462 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF1O75462 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC22.27■■□□□ 1.16
CRLF1O75462 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF1O75462 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF1O75462 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.26■■□□□ 1.15
CRLF1O75462 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.26■■□□□ 1.15
CRLF1O75462 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CRLF1O75462 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.25■■□□□ 1.15
CRLF1O75462 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.24■■□□□ 1.15
CRLF1O75462 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CRLF1O75462 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF1O75462 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CRLF1O75462 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF1O75462 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.22■■□□□ 1.15
CRLF1O75462 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CRLF1O75462 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CRLF1O75462 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CRLF1O75462 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.2■■□□□ 1.14
CRLF1O75462 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CRLF1O75462 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.19■■□□□ 1.14
CRLF1O75462 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CRLF1O75462 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CRLF1O75462 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CRLF1O75462 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CRLF1O75462 DUX4L11-201ENST00000611504 1267 ntBASIC22.18■■□□□ 1.14
CRLF1O75462 DUX4L12-201ENST00000614593 1267 ntBASIC22.18■■□□□ 1.14
CRLF1O75462 DUX4L14-201ENST00000621227 1267 ntBASIC22.18■■□□□ 1.14
CRLF1O75462 CR559946.2-201ENST00000623684 991 ntBASIC22.18■■□□□ 1.14
CRLF1O75462 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CRLF1O75462 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.16■■□□□ 1.14
CRLF1O75462 LINC01971-201ENST00000617888 1048 ntBASIC22.16■■□□□ 1.14
CRLF1O75462 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CRLF1O75462 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.15■■□□□ 1.14
CRLF1O75462 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.15■■□□□ 1.14
CRLF1O75462 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CRLF1O75462 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CRLF1O75462 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRLF1O75462 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRLF1O75462 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRLF1O75462 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRLF1O75462 AC108673.1-201ENST00000510422 1159 ntBASIC22.13■■□□□ 1.13
CRLF1O75462 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.13■■□□□ 1.13
CRLF1O75462 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CRLF1O75462 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CRLF1O75462 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CRLF1O75462 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.1■■□□□ 1.13
CRLF1O75462 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CRLF1O75462 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CRLF1O75462 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CRLF1O75462 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CRLF1O75462 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.08■■□□□ 1.13
CRLF1O75462 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CRLF1O75462 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CRLF1O75462 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms