Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.99■■■□□ 2.39
NCK2O43639 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
NCK2O43639 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NCK2O43639 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
NCK2O43639 AL133380.1-201ENST00000506013 324 ntBASIC29.95■■■□□ 2.39
NCK2O43639 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.94■■■□□ 2.38
NCK2O43639 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NCK2O43639 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NCK2O43639 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NCK2O43639 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NCK2O43639 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.92■■■□□ 2.38
NCK2O43639 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
NCK2O43639 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NCK2O43639 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NCK2O43639 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
NCK2O43639 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.9■■■□□ 2.38
NCK2O43639 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCK2O43639 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NCK2O43639 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
NCK2O43639 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.88■■■□□ 2.37
NCK2O43639 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NCK2O43639 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NCK2O43639 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCK2O43639 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.82■■■□□ 2.37
NCK2O43639 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
NCK2O43639 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
NCK2O43639 AC087741.3-201ENST00000624270 1347 ntBASIC29.79■■■□□ 2.36
NCK2O43639 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NCK2O43639 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
NCK2O43639 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
NCK2O43639 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NCK2O43639 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
NCK2O43639 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
NCK2O43639 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.78■■■□□ 2.36
NCK2O43639 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.78■■■□□ 2.36
NCK2O43639 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
NCK2O43639 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.77■■■□□ 2.36
NCK2O43639 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
NCK2O43639 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.77■■■□□ 2.36
NCK2O43639 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.76■■■□□ 2.35
NCK2O43639 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
NCK2O43639 AC044849.2-201ENST00000606596 710 ntBASIC29.75■■■□□ 2.35
NCK2O43639 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
NCK2O43639 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
NCK2O43639 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NCK2O43639 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
NCK2O43639 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.73■■■□□ 2.35
NCK2O43639 HLA-V-202ENST00000446817 847 ntBASIC29.71■■■□□ 2.35
NCK2O43639 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
NCK2O43639 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NCK2O43639 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.7■■■□□ 2.35
NCK2O43639 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.68■■■□□ 2.34
NCK2O43639 DUX4L28-201ENST00000623687 678 ntBASIC29.68■■■□□ 2.34
NCK2O43639 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NCK2O43639 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.67■■■□□ 2.34
NCK2O43639 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.66■■■□□ 2.34
NCK2O43639 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.65■■■□□ 2.34
NCK2O43639 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
NCK2O43639 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NCK2O43639 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.63■■■□□ 2.33
NCK2O43639 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
NCK2O43639 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NCK2O43639 MIR762-201ENST00000390236 83 ntBASIC29.61■■■□□ 2.33
NCK2O43639 AC005559.1-201ENST00000589661 871 ntBASIC29.61■■■□□ 2.33
NCK2O43639 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
NCK2O43639 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.6■■■□□ 2.33
NCK2O43639 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NCK2O43639 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
NCK2O43639 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NCK2O43639 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
NCK2O43639 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.59■■■□□ 2.33
NCK2O43639 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.58■■■□□ 2.33
NCK2O43639 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.58■■■□□ 2.33
NCK2O43639 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.57■■■□□ 2.32
NCK2O43639 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.56■■■□□ 2.32
NCK2O43639 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.56■■■□□ 2.32
NCK2O43639 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
NCK2O43639 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCK2O43639 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.55■■■□□ 2.32
NCK2O43639 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
NCK2O43639 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
NCK2O43639 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.53■■■□□ 2.32
NCK2O43639 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NCK2O43639 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NCK2O43639 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
NCK2O43639 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.49■■■□□ 2.31
NCK2O43639 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.49■■■□□ 2.31
NCK2O43639 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NCK2O43639 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NCK2O43639 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NCK2O43639 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.47■■■□□ 2.31
NCK2O43639 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NCK2O43639 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NCK2O43639 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NCK2O43639 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.46■■■□□ 2.31
NCK2O43639 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NCK2O43639 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NCK2O43639 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.45■■■□□ 2.31
NCK2O43639 ZNRF2P2-203ENST00000454624 420 ntBASIC29.45■■■□□ 2.31
NCK2O43639 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms