Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TRANK1O15050 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
TRANK1O15050 MIR639-201ENST00000384974 98 ntBASIC29.56■■■□□ 2.32
TRANK1O15050 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
TRANK1O15050 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TRANK1O15050 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.53■■■□□ 2.32
TRANK1O15050 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.53■■■□□ 2.32
TRANK1O15050 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRANK1O15050 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TRANK1O15050 HSD17B1P1-201ENST00000590052 955 ntBASIC29.52■■■□□ 2.32
TRANK1O15050 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
TRANK1O15050 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TRANK1O15050 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
TRANK1O15050 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TRANK1O15050 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TRANK1O15050 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.45■■■□□ 2.31
TRANK1O15050 MIR3648-2-201ENST00000581792 180 ntBASIC29.45■■■□□ 2.3
TRANK1O15050 MIR3648-1-201ENST00000615959 180 ntBASIC29.45■■■□□ 2.3
TRANK1O15050 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
TRANK1O15050 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.44■■■□□ 2.3
TRANK1O15050 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.44■■■□□ 2.3
TRANK1O15050 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.43■■■□□ 2.3
TRANK1O15050 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
TRANK1O15050 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TRANK1O15050 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TRANK1O15050 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.37■■■□□ 2.29
TRANK1O15050 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRANK1O15050 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRANK1O15050 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
TRANK1O15050 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.35■■■□□ 2.29
TRANK1O15050 DUX4L29-201ENST00000425409 679 ntBASIC29.34■■■□□ 2.29
TRANK1O15050 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
TRANK1O15050 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TRANK1O15050 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.34■■■□□ 2.29
TRANK1O15050 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.34■■■□□ 2.29
TRANK1O15050 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
TRANK1O15050 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.32■■■□□ 2.28
TRANK1O15050 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.32■■■□□ 2.28
TRANK1O15050 AC016575.1-201ENST00000607026 382 ntBASIC29.32■■■□□ 2.28
TRANK1O15050 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TRANK1O15050 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.31■■■□□ 2.28
TRANK1O15050 CR559946.2-201ENST00000623684 991 ntBASIC29.31■■■□□ 2.28
TRANK1O15050 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRANK1O15050 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.29■■■□□ 2.28
TRANK1O15050 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRANK1O15050 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TRANK1O15050 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
TRANK1O15050 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.28■■■□□ 2.28
TRANK1O15050 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.26■■■□□ 2.28
TRANK1O15050 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
TRANK1O15050 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
TRANK1O15050 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRANK1O15050 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
TRANK1O15050 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
TRANK1O15050 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TRANK1O15050 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.23■■■□□ 2.27
TRANK1O15050 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
TRANK1O15050 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
TRANK1O15050 AC021231.2-201ENST00000594613 730 ntBASIC29.21■■■□□ 2.27
TRANK1O15050 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
TRANK1O15050 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.21■■■□□ 2.27
TRANK1O15050 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
TRANK1O15050 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TRANK1O15050 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.2■■■□□ 2.26
TRANK1O15050 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
TRANK1O15050 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.18■■■□□ 2.26
TRANK1O15050 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.18■■■□□ 2.26
TRANK1O15050 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
TRANK1O15050 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
TRANK1O15050 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
TRANK1O15050 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.15■■■□□ 2.26
TRANK1O15050 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.14■■■□□ 2.26
TRANK1O15050 WASH5P-204ENST00000632292 975 ntBASIC29.14■■■□□ 2.26
TRANK1O15050 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.14■■■□□ 2.26
TRANK1O15050 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRANK1O15050 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRANK1O15050 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TRANK1O15050 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRANK1O15050 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
TRANK1O15050 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
TRANK1O15050 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.12■■■□□ 2.25
TRANK1O15050 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRANK1O15050 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.1■■■□□ 2.25
TRANK1O15050 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.09■■■□□ 2.25
TRANK1O15050 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
TRANK1O15050 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
TRANK1O15050 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TRANK1O15050 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
TRANK1O15050 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
TRANK1O15050 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TRANK1O15050 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
TRANK1O15050 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.03■■■□□ 2.24
TRANK1O15050 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
TRANK1O15050 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
TRANK1O15050 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TRANK1O15050 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TRANK1O15050 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TRANK1O15050 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
TRANK1O15050 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
TRANK1O15050 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.01■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms