Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CCL21O00585 ZNRF2P2-203ENST00000454624 420 ntBASIC24.46■■□□□ 1.51
CCL21O00585 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.45■■□□□ 1.5
CCL21O00585 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
CCL21O00585 WASH5P-204ENST00000632292 975 ntBASIC24.42■■□□□ 1.5
CCL21O00585 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.4■■□□□ 1.5
CCL21O00585 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCL21O00585 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCL21O00585 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.39■■□□□ 1.49
CCL21O00585 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.38■■□□□ 1.49
CCL21O00585 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.36■■□□□ 1.49
CCL21O00585 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCL21O00585 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCL21O00585 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCL21O00585 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCL21O00585 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.35■■□□□ 1.49
CCL21O00585 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCL21O00585 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL21O00585 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL21O00585 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCL21O00585 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL21O00585 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCL21O00585 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCL21O00585 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.32■■□□□ 1.48
CCL21O00585 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCL21O00585 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCL21O00585 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCL21O00585 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCL21O00585 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.29■■□□□ 1.48
CCL21O00585 DUX4L29-201ENST00000425409 679 ntBASIC24.29■■□□□ 1.48
CCL21O00585 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CCL21O00585 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCL21O00585 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCL21O00585 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.27■■□□□ 1.48
CCL21O00585 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCL21O00585 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.26■■□□□ 1.47
CCL21O00585 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.26■■□□□ 1.47
CCL21O00585 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCL21O00585 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCL21O00585 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCL21O00585 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCL21O00585 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCL21O00585 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCL21O00585 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCL21O00585 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCL21O00585 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CCL21O00585 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CCL21O00585 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.2■■□□□ 1.46
CCL21O00585 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCL21O00585 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCL21O00585 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCL21O00585 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CCL21O00585 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CCL21O00585 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCL21O00585 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCL21O00585 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.17■■□□□ 1.46
CCL21O00585 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCL21O00585 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.16■■□□□ 1.46
CCL21O00585 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCL21O00585 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.15■■□□□ 1.46
CCL21O00585 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.14■■□□□ 1.45
CCL21O00585 AC021231.2-201ENST00000594613 730 ntBASIC24.14■■□□□ 1.45
CCL21O00585 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
CCL21O00585 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCL21O00585 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCL21O00585 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CCL21O00585 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.12■■□□□ 1.45
CCL21O00585 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCL21O00585 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCL21O00585 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCL21O00585 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.09■■□□□ 1.45
CCL21O00585 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.09■■□□□ 1.45
CCL21O00585 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCL21O00585 MIR4449-201ENST00000578365 66 ntBASIC24.07■■□□□ 1.44
CCL21O00585 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.07■■□□□ 1.44
CCL21O00585 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCL21O00585 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CCL21O00585 AC108673.1-201ENST00000510422 1159 ntBASIC24.06■■□□□ 1.44
CCL21O00585 MIR639-201ENST00000384974 98 ntBASIC24.05■■□□□ 1.44
CCL21O00585 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCL21O00585 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.04■■□□□ 1.44
CCL21O00585 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCL21O00585 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCL21O00585 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.03■■□□□ 1.44
CCL21O00585 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.02■■□□□ 1.44
CCL21O00585 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCL21O00585 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.01■■□□□ 1.43
CCL21O00585 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.01■■□□□ 1.43
CCL21O00585 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCL21O00585 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCL21O00585 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.99■■□□□ 1.43
CCL21O00585 MIR6090-201ENST00000622481 60 ntBASIC23.99■■□□□ 1.43
CCL21O00585 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCL21O00585 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CCL21O00585 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.98■■□□□ 1.43
CCL21O00585 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCL21O00585 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCL21O00585 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCL21O00585 AC016575.1-201ENST00000607026 382 ntBASIC23.97■■□□□ 1.43
CCL21O00585 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms