Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SSC5DA1L4H1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.62■■■□□ 2.81
SSC5DA1L4H1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.62■■■□□ 2.81
SSC5DA1L4H1 ZNRF2P2-203ENST00000454624 420 ntBASIC32.61■■■□□ 2.81
SSC5DA1L4H1 WASH5P-204ENST00000632292 975 ntBASIC32.61■■■□□ 2.81
SSC5DA1L4H1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
SSC5DA1L4H1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SSC5DA1L4H1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.57■■■□□ 2.8
SSC5DA1L4H1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
SSC5DA1L4H1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.56■■■□□ 2.8
SSC5DA1L4H1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SSC5DA1L4H1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.55■■■□□ 2.8
SSC5DA1L4H1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.55■■■□□ 2.8
SSC5DA1L4H1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.54■■■□□ 2.8
SSC5DA1L4H1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
SSC5DA1L4H1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SSC5DA1L4H1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SSC5DA1L4H1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SSC5DA1L4H1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SSC5DA1L4H1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SSC5DA1L4H1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.46■■■□□ 2.79
SSC5DA1L4H1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.45■■■□□ 2.79
SSC5DA1L4H1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.44■■■□□ 2.78
SSC5DA1L4H1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SSC5DA1L4H1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SSC5DA1L4H1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SSC5DA1L4H1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
SSC5DA1L4H1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
SSC5DA1L4H1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SSC5DA1L4H1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SSC5DA1L4H1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.37■■■□□ 2.77
SSC5DA1L4H1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SSC5DA1L4H1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SSC5DA1L4H1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
SSC5DA1L4H1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SSC5DA1L4H1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
SSC5DA1L4H1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SSC5DA1L4H1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
SSC5DA1L4H1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.31■■■□□ 2.76
SSC5DA1L4H1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SSC5DA1L4H1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SSC5DA1L4H1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SSC5DA1L4H1 DUX4L29-201ENST00000425409 679 ntBASIC32.28■■■□□ 2.76
SSC5DA1L4H1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.28■■■□□ 2.76
SSC5DA1L4H1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SSC5DA1L4H1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SSC5DA1L4H1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
SSC5DA1L4H1 AC021231.2-201ENST00000594613 730 ntBASIC32.25■■■□□ 2.75
SSC5DA1L4H1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SSC5DA1L4H1 MIR4449-201ENST00000578365 66 ntBASIC32.24■■■□□ 2.75
SSC5DA1L4H1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SSC5DA1L4H1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SSC5DA1L4H1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
SSC5DA1L4H1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SSC5DA1L4H1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.19■■■□□ 2.74
SSC5DA1L4H1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.16■■■□□ 2.74
SSC5DA1L4H1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
SSC5DA1L4H1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.15■■■□□ 2.74
SSC5DA1L4H1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SSC5DA1L4H1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SSC5DA1L4H1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SSC5DA1L4H1 MIR639-201ENST00000384974 98 ntBASIC32.14■■■□□ 2.74
SSC5DA1L4H1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.12■■■□□ 2.73
SSC5DA1L4H1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SSC5DA1L4H1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SSC5DA1L4H1 MIR6090-201ENST00000622481 60 ntBASIC32.1■■■□□ 2.73
SSC5DA1L4H1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
SSC5DA1L4H1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.07■■■□□ 2.72
SSC5DA1L4H1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.07■■■□□ 2.72
SSC5DA1L4H1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SSC5DA1L4H1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SSC5DA1L4H1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.05■■■□□ 2.72
SSC5DA1L4H1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.05■■■□□ 2.72
SSC5DA1L4H1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SSC5DA1L4H1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SSC5DA1L4H1 AC016575.1-201ENST00000607026 382 ntBASIC32.02■■■□□ 2.72
SSC5DA1L4H1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.02■■■□□ 2.72
SSC5DA1L4H1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SSC5DA1L4H1 MIR3648-2-201ENST00000581792 180 ntBASIC32.02■■■□□ 2.72
SSC5DA1L4H1 MIR3648-1-201ENST00000615959 180 ntBASIC32.02■■■□□ 2.72
SSC5DA1L4H1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
SSC5DA1L4H1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
SSC5DA1L4H1 CR559946.2-201ENST00000623684 991 ntBASIC32.01■■■□□ 2.71
SSC5DA1L4H1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms