Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
TCRBV9S1A1TA0A576 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
TCRBV9S1A1TA0A576 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
TCRBV9S1A1TA0A576 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TCRBV9S1A1TA0A576 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.43■■□□□ 1.98
TCRBV9S1A1TA0A576 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TCRBV9S1A1TA0A576 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TCRBV9S1A1TA0A576 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TCRBV9S1A1TA0A576 ABCB10P3-201ENST00000561950 2166 ntBASIC27.41■■□□□ 1.98
TCRBV9S1A1TA0A576 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TCRBV9S1A1TA0A576 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
TCRBV9S1A1TA0A576 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TCRBV9S1A1TA0A576 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TCRBV9S1A1TA0A576 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TCRBV9S1A1TA0A576 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TCRBV9S1A1TA0A576 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TCRBV9S1A1TA0A576 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.37■■□□□ 1.97
TCRBV9S1A1TA0A576 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TCRBV9S1A1TA0A576 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TCRBV9S1A1TA0A576 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
TCRBV9S1A1TA0A576 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TCRBV9S1A1TA0A576 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TCRBV9S1A1TA0A576 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
TCRBV9S1A1TA0A576 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
TCRBV9S1A1TA0A576 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TCRBV9S1A1TA0A576 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
TCRBV9S1A1TA0A576 AL031258.1-201ENST00000623562 325 ntBASIC27.3■■□□□ 1.96
TCRBV9S1A1TA0A576 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TCRBV9S1A1TA0A576 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
TCRBV9S1A1TA0A576 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TCRBV9S1A1TA0A576 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TCRBV9S1A1TA0A576 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TCRBV9S1A1TA0A576 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TCRBV9S1A1TA0A576 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TCRBV9S1A1TA0A576 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TCRBV9S1A1TA0A576 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.25■■□□□ 1.95
TCRBV9S1A1TA0A576 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TCRBV9S1A1TA0A576 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TCRBV9S1A1TA0A576 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TCRBV9S1A1TA0A576 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TCRBV9S1A1TA0A576 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TCRBV9S1A1TA0A576 AC139426.1-201ENST00000568218 2529 ntBASIC27.22■■□□□ 1.95
TCRBV9S1A1TA0A576 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TCRBV9S1A1TA0A576 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TCRBV9S1A1TA0A576 AL161658.1-201ENST00000623641 1967 ntBASIC27.21■■□□□ 1.95
TCRBV9S1A1TA0A576 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TCRBV9S1A1TA0A576 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.2■■□□□ 1.95
TCRBV9S1A1TA0A576 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
TCRBV9S1A1TA0A576 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TCRBV9S1A1TA0A576 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TCRBV9S1A1TA0A576 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.18■■□□□ 1.94
TCRBV9S1A1TA0A576 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.18■■□□□ 1.94
TCRBV9S1A1TA0A576 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.18■■□□□ 1.94
TCRBV9S1A1TA0A576 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TCRBV9S1A1TA0A576 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TCRBV9S1A1TA0A576 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TCRBV9S1A1TA0A576 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.17■■□□□ 1.94
TCRBV9S1A1TA0A576 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
TCRBV9S1A1TA0A576 ST7-AS1-201ENST00000456775 1889 ntBASIC27.17■■□□□ 1.94
TCRBV9S1A1TA0A576 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
TCRBV9S1A1TA0A576 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.16■■□□□ 1.94
TCRBV9S1A1TA0A576 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TCRBV9S1A1TA0A576 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TCRBV9S1A1TA0A576 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TCRBV9S1A1TA0A576 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.13■■□□□ 1.93
TCRBV9S1A1TA0A576 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TCRBV9S1A1TA0A576 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
TCRBV9S1A1TA0A576 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
TCRBV9S1A1TA0A576 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TCRBV9S1A1TA0A576 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TCRBV9S1A1TA0A576 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.11■■□□□ 1.93
TCRBV9S1A1TA0A576 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.11■■□□□ 1.93
TCRBV9S1A1TA0A576 AP002365.1-201ENST00000603448 772 ntBASIC27.1■■□□□ 1.93
TCRBV9S1A1TA0A576 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.1■■□□□ 1.93
TCRBV9S1A1TA0A576 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TCRBV9S1A1TA0A576 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TCRBV9S1A1TA0A576 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
TCRBV9S1A1TA0A576 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TCRBV9S1A1TA0A576 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
TCRBV9S1A1TA0A576 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TCRBV9S1A1TA0A576 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
TCRBV9S1A1TA0A576 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
TCRBV9S1A1TA0A576 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TCRBV9S1A1TA0A576 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
TCRBV9S1A1TA0A576 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TCRBV9S1A1TA0A576 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TCRBV9S1A1TA0A576 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TCRBV9S1A1TA0A576 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TCRBV9S1A1TA0A576 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TCRBV9S1A1TA0A576 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
TCRBV9S1A1TA0A576 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
TCRBV9S1A1TA0A576 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
TCRBV9S1A1TA0A576 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
TCRBV9S1A1TA0A576 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.01■■□□□ 1.91
TCRBV9S1A1TA0A576 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TCRBV9S1A1TA0A576 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TCRBV9S1A1TA0A576 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
TCRBV9S1A1TA0A576 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TCRBV9S1A1TA0A576 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TCRBV9S1A1TA0A576 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms