Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DUXBA0A1W2PPF3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DUXBA0A1W2PPF3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
DUXBA0A1W2PPF3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DUXBA0A1W2PPF3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.2■■□□□ 1.14
DUXBA0A1W2PPF3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DUXBA0A1W2PPF3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DUXBA0A1W2PPF3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DUXBA0A1W2PPF3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DUXBA0A1W2PPF3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
DUXBA0A1W2PPF3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DUXBA0A1W2PPF3 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.16■■□□□ 1.14
DUXBA0A1W2PPF3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
DUXBA0A1W2PPF3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DUXBA0A1W2PPF3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DUXBA0A1W2PPF3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.15■■□□□ 1.14
DUXBA0A1W2PPF3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DUXBA0A1W2PPF3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
DUXBA0A1W2PPF3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DUXBA0A1W2PPF3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DUXBA0A1W2PPF3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
DUXBA0A1W2PPF3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
DUXBA0A1W2PPF3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
DUXBA0A1W2PPF3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DUXBA0A1W2PPF3 AL161658.1-201ENST00000623641 1967 ntBASIC22.1■■□□□ 1.13
DUXBA0A1W2PPF3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DUXBA0A1W2PPF3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.09■■□□□ 1.13
DUXBA0A1W2PPF3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DUXBA0A1W2PPF3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DUXBA0A1W2PPF3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DUXBA0A1W2PPF3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DUXBA0A1W2PPF3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
DUXBA0A1W2PPF3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DUXBA0A1W2PPF3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
DUXBA0A1W2PPF3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DUXBA0A1W2PPF3 ST7-AS1-201ENST00000456775 1889 ntBASIC22.06■■□□□ 1.12
DUXBA0A1W2PPF3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DUXBA0A1W2PPF3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DUXBA0A1W2PPF3 AC139426.1-201ENST00000568218 2529 ntBASIC22.05■■□□□ 1.12
DUXBA0A1W2PPF3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DUXBA0A1W2PPF3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.03■■□□□ 1.12
DUXBA0A1W2PPF3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DUXBA0A1W2PPF3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.03■■□□□ 1.12
DUXBA0A1W2PPF3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
DUXBA0A1W2PPF3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DUXBA0A1W2PPF3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DUXBA0A1W2PPF3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
DUXBA0A1W2PPF3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
DUXBA0A1W2PPF3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22■■□□□ 1.11
DUXBA0A1W2PPF3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22■■□□□ 1.11
DUXBA0A1W2PPF3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.99■■□□□ 1.11
DUXBA0A1W2PPF3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.98■■□□□ 1.11
DUXBA0A1W2PPF3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DUXBA0A1W2PPF3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DUXBA0A1W2PPF3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.97■■□□□ 1.11
DUXBA0A1W2PPF3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DUXBA0A1W2PPF3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DUXBA0A1W2PPF3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DUXBA0A1W2PPF3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.95■■□□□ 1.1
DUXBA0A1W2PPF3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DUXBA0A1W2PPF3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
DUXBA0A1W2PPF3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.94■■□□□ 1.1
DUXBA0A1W2PPF3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
DUXBA0A1W2PPF3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DUXBA0A1W2PPF3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DUXBA0A1W2PPF3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DUXBA0A1W2PPF3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DUXBA0A1W2PPF3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DUXBA0A1W2PPF3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DUXBA0A1W2PPF3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DUXBA0A1W2PPF3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
DUXBA0A1W2PPF3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DUXBA0A1W2PPF3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.89■■□□□ 1.09
DUXBA0A1W2PPF3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
DUXBA0A1W2PPF3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.88■■□□□ 1.09
DUXBA0A1W2PPF3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DUXBA0A1W2PPF3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.88■■□□□ 1.09
DUXBA0A1W2PPF3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DUXBA0A1W2PPF3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DUXBA0A1W2PPF3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DUXBA0A1W2PPF3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
DUXBA0A1W2PPF3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DUXBA0A1W2PPF3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DUXBA0A1W2PPF3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DUXBA0A1W2PPF3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.85■■□□□ 1.09
DUXBA0A1W2PPF3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DUXBA0A1W2PPF3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DUXBA0A1W2PPF3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DUXBA0A1W2PPF3 AC142086.6-201ENST00000621154 1765 ntBASIC21.84■■□□□ 1.09
DUXBA0A1W2PPF3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DUXBA0A1W2PPF3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
DUXBA0A1W2PPF3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DUXBA0A1W2PPF3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DUXBA0A1W2PPF3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DUXBA0A1W2PPF3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
DUXBA0A1W2PPF3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DUXBA0A1W2PPF3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DUXBA0A1W2PPF3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.81■■□□□ 1.08
DUXBA0A1W2PPF3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DUXBA0A1W2PPF3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms