Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRBV5-4A0A0C4DH59 AC136428.2-201ENST00000563187 214 ntBASIC26.94■■□□□ 1.9
TRBV5-4A0A0C4DH59 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRBV5-4A0A0C4DH59 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRBV5-4A0A0C4DH59 WASH5P-204ENST00000632292 975 ntBASIC26.93■■□□□ 1.9
TRBV5-4A0A0C4DH59 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.93■■□□□ 1.9
TRBV5-4A0A0C4DH59 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRBV5-4A0A0C4DH59 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
TRBV5-4A0A0C4DH59 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TRBV5-4A0A0C4DH59 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
TRBV5-4A0A0C4DH59 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRBV5-4A0A0C4DH59 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TRBV5-4A0A0C4DH59 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.9■■□□□ 1.9
TRBV5-4A0A0C4DH59 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.9■■□□□ 1.9
TRBV5-4A0A0C4DH59 AC097358.2-201ENST00000607541 1159 ntBASIC26.89■■□□□ 1.9
TRBV5-4A0A0C4DH59 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TRBV5-4A0A0C4DH59 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.88■■□□□ 1.89
TRBV5-4A0A0C4DH59 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.88■■□□□ 1.89
TRBV5-4A0A0C4DH59 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRBV5-4A0A0C4DH59 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRBV5-4A0A0C4DH59 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TRBV5-4A0A0C4DH59 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.83■■□□□ 1.89
TRBV5-4A0A0C4DH59 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRBV5-4A0A0C4DH59 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TRBV5-4A0A0C4DH59 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.82■■□□□ 1.88
TRBV5-4A0A0C4DH59 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
TRBV5-4A0A0C4DH59 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.82■■□□□ 1.88
TRBV5-4A0A0C4DH59 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.81■■□□□ 1.88
TRBV5-4A0A0C4DH59 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TRBV5-4A0A0C4DH59 CAHM-201ENST00000604200 896 ntBASIC26.81■■□□□ 1.88
TRBV5-4A0A0C4DH59 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
TRBV5-4A0A0C4DH59 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRBV5-4A0A0C4DH59 AL391121.1-201ENST00000607967 1349 ntBASIC26.79■■□□□ 1.88
TRBV5-4A0A0C4DH59 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRBV5-4A0A0C4DH59 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.78■■□□□ 1.88
TRBV5-4A0A0C4DH59 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.78■■□□□ 1.88
TRBV5-4A0A0C4DH59 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRBV5-4A0A0C4DH59 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TRBV5-4A0A0C4DH59 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TRBV5-4A0A0C4DH59 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.76■■□□□ 1.87
TRBV5-4A0A0C4DH59 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRBV5-4A0A0C4DH59 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRBV5-4A0A0C4DH59 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TRBV5-4A0A0C4DH59 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.76■■□□□ 1.87
TRBV5-4A0A0C4DH59 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.75■■□□□ 1.87
TRBV5-4A0A0C4DH59 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRBV5-4A0A0C4DH59 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRBV5-4A0A0C4DH59 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
TRBV5-4A0A0C4DH59 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRBV5-4A0A0C4DH59 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.73■■□□□ 1.87
TRBV5-4A0A0C4DH59 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TRBV5-4A0A0C4DH59 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRBV5-4A0A0C4DH59 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRBV5-4A0A0C4DH59 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRBV5-4A0A0C4DH59 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
TRBV5-4A0A0C4DH59 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRBV5-4A0A0C4DH59 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.7■■□□□ 1.86
TRBV5-4A0A0C4DH59 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRBV5-4A0A0C4DH59 AL161658.1-201ENST00000623641 1967 ntBASIC26.69■■□□□ 1.86
TRBV5-4A0A0C4DH59 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRBV5-4A0A0C4DH59 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TRBV5-4A0A0C4DH59 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRBV5-4A0A0C4DH59 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRBV5-4A0A0C4DH59 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.67■■□□□ 1.86
TRBV5-4A0A0C4DH59 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TRBV5-4A0A0C4DH59 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.67■■□□□ 1.86
TRBV5-4A0A0C4DH59 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
TRBV5-4A0A0C4DH59 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRBV5-4A0A0C4DH59 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.65■■□□□ 1.86
TRBV5-4A0A0C4DH59 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRBV5-4A0A0C4DH59 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRBV5-4A0A0C4DH59 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.65■■□□□ 1.86
TRBV5-4A0A0C4DH59 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRBV5-4A0A0C4DH59 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRBV5-4A0A0C4DH59 SUZ12P1-203ENST00000578195 985 ntBASIC26.63■■□□□ 1.85
TRBV5-4A0A0C4DH59 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRBV5-4A0A0C4DH59 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
TRBV5-4A0A0C4DH59 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRBV5-4A0A0C4DH59 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.62■■□□□ 1.85
TRBV5-4A0A0C4DH59 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.61■■□□□ 1.85
TRBV5-4A0A0C4DH59 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRBV5-4A0A0C4DH59 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TRBV5-4A0A0C4DH59 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TRBV5-4A0A0C4DH59 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRBV5-4A0A0C4DH59 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
TRBV5-4A0A0C4DH59 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRBV5-4A0A0C4DH59 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.58■■□□□ 1.85
TRBV5-4A0A0C4DH59 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.58■■□□□ 1.85
TRBV5-4A0A0C4DH59 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
TRBV5-4A0A0C4DH59 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRBV5-4A0A0C4DH59 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.57■■□□□ 1.84
TRBV5-4A0A0C4DH59 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRBV5-4A0A0C4DH59 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TRBV5-4A0A0C4DH59 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRBV5-4A0A0C4DH59 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TRBV5-4A0A0C4DH59 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRBV5-4A0A0C4DH59 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRBV5-4A0A0C4DH59 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRBV5-4A0A0C4DH59 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRBV5-4A0A0C4DH59 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms