Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAV23DV6A0A075B6W5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV23DV6A0A075B6W5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV23DV6A0A075B6W5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAV23DV6A0A075B6W5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV23DV6A0A075B6W5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV23DV6A0A075B6W5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV23DV6A0A075B6W5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV23DV6A0A075B6W5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV23DV6A0A075B6W5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV23DV6A0A075B6W5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV23DV6A0A075B6W5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV23DV6A0A075B6W5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV23DV6A0A075B6W5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV23DV6A0A075B6W5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV23DV6A0A075B6W5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRAV23DV6A0A075B6W5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV23DV6A0A075B6W5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV23DV6A0A075B6W5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV23DV6A0A075B6W5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV23DV6A0A075B6W5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV23DV6A0A075B6W5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV23DV6A0A075B6W5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV23DV6A0A075B6W5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV23DV6A0A075B6W5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV23DV6A0A075B6W5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV23DV6A0A075B6W5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV23DV6A0A075B6W5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV23DV6A0A075B6W5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV23DV6A0A075B6W5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV23DV6A0A075B6W5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV23DV6A0A075B6W5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV23DV6A0A075B6W5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV23DV6A0A075B6W5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV23DV6A0A075B6W5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV23DV6A0A075B6W5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TRAV23DV6A0A075B6W5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV23DV6A0A075B6W5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV23DV6A0A075B6W5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV23DV6A0A075B6W5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRAV23DV6A0A075B6W5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRAV23DV6A0A075B6W5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV23DV6A0A075B6W5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV23DV6A0A075B6W5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV23DV6A0A075B6W5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV23DV6A0A075B6W5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRAV23DV6A0A075B6W5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV23DV6A0A075B6W5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV23DV6A0A075B6W5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TRAV23DV6A0A075B6W5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV23DV6A0A075B6W5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV23DV6A0A075B6W5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV23DV6A0A075B6W5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRAV23DV6A0A075B6W5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV23DV6A0A075B6W5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV23DV6A0A075B6W5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV23DV6A0A075B6W5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV23DV6A0A075B6W5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV23DV6A0A075B6W5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV23DV6A0A075B6W5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV23DV6A0A075B6W5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV23DV6A0A075B6W5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV23DV6A0A075B6W5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV23DV6A0A075B6W5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV23DV6A0A075B6W5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV23DV6A0A075B6W5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV23DV6A0A075B6W5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV23DV6A0A075B6W5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV23DV6A0A075B6W5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV23DV6A0A075B6W5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV23DV6A0A075B6W5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV23DV6A0A075B6W5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV23DV6A0A075B6W5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV23DV6A0A075B6W5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV23DV6A0A075B6W5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV23DV6A0A075B6W5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV23DV6A0A075B6W5 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV23DV6A0A075B6W5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV23DV6A0A075B6W5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV23DV6A0A075B6W5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV23DV6A0A075B6W5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV23DV6A0A075B6W5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV23DV6A0A075B6W5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TRAV23DV6A0A075B6W5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV23DV6A0A075B6W5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV23DV6A0A075B6W5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV23DV6A0A075B6W5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRAV23DV6A0A075B6W5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV23DV6A0A075B6W5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV23DV6A0A075B6W5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV23DV6A0A075B6W5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV23DV6A0A075B6W5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV23DV6A0A075B6W5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV23DV6A0A075B6W5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV23DV6A0A075B6W5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV23DV6A0A075B6W5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV23DV6A0A075B6W5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV23DV6A0A075B6W5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV23DV6A0A075B6W5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV23DV6A0A075B6W5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms