Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.33■□□□□ 0.68
TRBV25-1A0A075B6N4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRBV25-1A0A075B6N4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV25-1A0A075B6N4 ZNRF2P1-201ENST00000441407 443 ntBASIC19.31■□□□□ 0.68
TRBV25-1A0A075B6N4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV25-1A0A075B6N4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV25-1A0A075B6N4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV25-1A0A075B6N4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV25-1A0A075B6N4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV25-1A0A075B6N4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV25-1A0A075B6N4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV25-1A0A075B6N4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV25-1A0A075B6N4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV25-1A0A075B6N4 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV25-1A0A075B6N4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV25-1A0A075B6N4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV25-1A0A075B6N4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRBV25-1A0A075B6N4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV25-1A0A075B6N4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV25-1A0A075B6N4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV25-1A0A075B6N4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.26■□□□□ 0.67
TRBV25-1A0A075B6N4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.26■□□□□ 0.67
TRBV25-1A0A075B6N4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV25-1A0A075B6N4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV25-1A0A075B6N4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV25-1A0A075B6N4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV25-1A0A075B6N4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV25-1A0A075B6N4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV25-1A0A075B6N4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRBV25-1A0A075B6N4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV25-1A0A075B6N4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV25-1A0A075B6N4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV25-1A0A075B6N4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRBV25-1A0A075B6N4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV25-1A0A075B6N4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV25-1A0A075B6N4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV25-1A0A075B6N4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV25-1A0A075B6N4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
TRBV25-1A0A075B6N4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV25-1A0A075B6N4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV25-1A0A075B6N4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV25-1A0A075B6N4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
TRBV25-1A0A075B6N4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV25-1A0A075B6N4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV25-1A0A075B6N4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV25-1A0A075B6N4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV25-1A0A075B6N4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV25-1A0A075B6N4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV25-1A0A075B6N4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV25-1A0A075B6N4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV25-1A0A075B6N4 AC135731.1-201ENST00000569415 2548 ntBASIC19.16■□□□□ 0.66
TRBV25-1A0A075B6N4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 AC120057.4-201ENST00000624722 1615 ntBASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRBV25-1A0A075B6N4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV25-1A0A075B6N4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV25-1A0A075B6N4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV25-1A0A075B6N4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV25-1A0A075B6N4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRBV25-1A0A075B6N4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV25-1A0A075B6N4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV25-1A0A075B6N4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV25-1A0A075B6N4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV25-1A0A075B6N4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.11■□□□□ 0.65
TRBV25-1A0A075B6N4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV25-1A0A075B6N4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV25-1A0A075B6N4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV25-1A0A075B6N4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRBV25-1A0A075B6N4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV25-1A0A075B6N4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV25-1A0A075B6N4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV25-1A0A075B6N4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV25-1A0A075B6N4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV25-1A0A075B6N4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.08■□□□□ 0.65
TRBV25-1A0A075B6N4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV25-1A0A075B6N4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV25-1A0A075B6N4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
TRBV25-1A0A075B6N4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV25-1A0A075B6N4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV25-1A0A075B6N4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV25-1A0A075B6N4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV25-1A0A075B6N4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV25-1A0A075B6N4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV25-1A0A075B6N4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV25-1A0A075B6N4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV25-1A0A075B6N4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRBV25-1A0A075B6N4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV25-1A0A075B6N4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV25-1A0A075B6N4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV25-1A0A075B6N4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV25-1A0A075B6N4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV25-1A0A075B6N4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV25-1A0A075B6N4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms