Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
BCL11BQ9C0K0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 AL596275.1-201ENST00000423464 877 ntBASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC28.34■■■□□ 2.13
BCL11BQ9C0K0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
BCL11BQ9C0K0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
BCL11BQ9C0K0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
BCL11BQ9C0K0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 RARRES2P4-201ENST00000514074 484 ntBASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 ADM-205ENST00000528544 586 ntTSL 2 BASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 AC145676.1-201ENST00000514988 2004 ntBASIC28.3■■■□□ 2.12
BCL11BQ9C0K0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BCL11BQ9C0K0 MKRN4P-201ENST00000444706 1521 ntBASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.28■■■□□ 2.12
BCL11BQ9C0K0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 KRT18P20-201ENST00000548986 1279 ntBASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 AC092118.2-201ENST00000613495 667 ntBASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
BCL11BQ9C0K0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.12
BCL11BQ9C0K0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 UQCRFS1P1-201ENST00000435169 820 ntBASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 AC013268.1-206ENST00000638368 961 ntBASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 AC112229.1-201ENST00000639295 961 ntBASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
BCL11BQ9C0K0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 ESRRAP1-201ENST00000400596 1257 ntBASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 RPS2P4-201ENST00000476944 856 ntBASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 AC068338.2-201ENST00000563278 1430 ntBASIC28.25■■■□□ 2.11
BCL11BQ9C0K0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms