Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMIM3Q9BZL3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM3Q9BZL3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM3Q9BZL3 Z98882.1-201ENST00000622160 2253 ntBASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM3Q9BZL3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMIM3Q9BZL3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 FEM1AP4-201ENST00000443167 1987 ntBASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 AL391422.3-201ENST00000603791 2761 ntBASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM3Q9BZL3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SMIM3Q9BZL3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.61■□□□□ 0.41
SMIM3Q9BZL3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM3Q9BZL3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms