Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PCNX1Q96RV3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 AL138781.1-201ENST00000566567 1274 ntBASIC19.2■□□□□ 0.66
PCNX1Q96RV3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 MYCNOS-205ENST00000641950 531 ntBASIC19.2■□□□□ 0.66
PCNX1Q96RV3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 AC008687.6-201ENST00000596318 630 ntBASIC19.2■□□□□ 0.66
PCNX1Q96RV3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCNX1Q96RV3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.19■□□□□ 0.66
PCNX1Q96RV3 AL139125.2-201ENST00000623134 1869 ntBASIC19.19■□□□□ 0.66
PCNX1Q96RV3 AC009237.3-201ENST00000393279 1427 ntBASIC19.18■□□□□ 0.66
PCNX1Q96RV3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 KRT18P6-201ENST00000555540 1265 ntBASIC19.18■□□□□ 0.66
PCNX1Q96RV3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCNX1Q96RV3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 AC231657.2-201ENST00000624556 255 ntBASIC19.17■□□□□ 0.66
PCNX1Q96RV3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 AC007322.1-201ENST00000426983 750 ntBASIC19.17■□□□□ 0.66
PCNX1Q96RV3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.17■□□□□ 0.66
PCNX1Q96RV3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 AC079140.4-201ENST00000507448 529 ntBASIC19.16■□□□□ 0.66
PCNX1Q96RV3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 LINC01960-201ENST00000563759 1884 ntBASIC19.16■□□□□ 0.66
PCNX1Q96RV3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 AC055733.4-201ENST00000638462 1354 ntBASIC19.16■□□□□ 0.66
PCNX1Q96RV3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 AC010141.3-201ENST00000456659 717 ntBASIC19.16■□□□□ 0.66
PCNX1Q96RV3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.16■□□□□ 0.66
PCNX1Q96RV3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCNX1Q96RV3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms