Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 AC242852.2-201ENST00000615738 1807 ntBASIC16.32■□□□□ 0.2
AP1S3Q96PC3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S3Q96PC3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 AL137060.1-201ENST00000618151 2648 ntBASIC16.31■□□□□ 0.2
AP1S3Q96PC3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 AL592293.1-201ENST00000502889 1188 ntBASIC16.31■□□□□ 0.2
AP1S3Q96PC3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S3Q96PC3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 AC131274.2-201ENST00000580697 1507 ntBASIC16.3■□□□□ 0.2
AP1S3Q96PC3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S3Q96PC3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 SPCS2P3-201ENST00000500401 656 ntBASIC16.29■□□□□ 0.2
AP1S3Q96PC3 MIR4449-201ENST00000578365 66 ntBASIC16.29■□□□□ 0.2
AP1S3Q96PC3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S3Q96PC3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 RNF126P1-201ENST00000567452 1320 ntBASIC16.28■□□□□ 0.2
AP1S3Q96PC3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.28■□□□□ 0.2
AP1S3Q96PC3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S3Q96PC3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S3Q96PC3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms