Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.23■■□□□ 1.31
SHC3Q92529 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.23■■□□□ 1.31
SHC3Q92529 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHC3Q92529 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHC3Q92529 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.23■■□□□ 1.31
SHC3Q92529 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHC3Q92529 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHC3Q92529 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.22■■□□□ 1.31
SHC3Q92529 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.22■■□□□ 1.31
SHC3Q92529 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.22■■□□□ 1.31
SHC3Q92529 AC135279.3-201ENST00000610945 1311 ntBASIC23.22■■□□□ 1.31
SHC3Q92529 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHC3Q92529 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHC3Q92529 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHC3Q92529 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHC3Q92529 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SHC3Q92529 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SHC3Q92529 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SHC3Q92529 BX842568.3-201ENST00000418104 571 ntBASIC23.21■■□□□ 1.31
SHC3Q92529 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.21■■□□□ 1.31
SHC3Q92529 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.21■■□□□ 1.31
SHC3Q92529 OXCT2P1-201ENST00000447263 1535 ntBASIC23.21■■□□□ 1.31
SHC3Q92529 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHC3Q92529 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHC3Q92529 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHC3Q92529 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SHC3Q92529 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHC3Q92529 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.2■■□□□ 1.3
SHC3Q92529 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SHC3Q92529 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 AC096631.2-201ENST00000436136 790 ntBASIC23.2■■□□□ 1.3
SHC3Q92529 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.2■■□□□ 1.3
SHC3Q92529 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHC3Q92529 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
SHC3Q92529 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.19■■□□□ 1.3
SHC3Q92529 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHC3Q92529 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 OR7E47P-201ENST00000546390 1422 ntBASIC23.18■■□□□ 1.3
SHC3Q92529 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SHC3Q92529 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.18■■□□□ 1.3
SHC3Q92529 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SHC3Q92529 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHC3Q92529 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHC3Q92529 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.17■■□□□ 1.3
SHC3Q92529 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
SHC3Q92529 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC3Q92529 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.17■■□□□ 1.3
SHC3Q92529 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.17■■□□□ 1.3
SHC3Q92529 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.17■■□□□ 1.3
SHC3Q92529 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SHC3Q92529 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.17■■□□□ 1.3
SHC3Q92529 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHC3Q92529 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC3Q92529 FAM99A-202ENST00000538190 1989 ntBASIC23.16■■□□□ 1.3
SHC3Q92529 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.16■■□□□ 1.3
SHC3Q92529 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC3Q92529 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
SHC3Q92529 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.16■■□□□ 1.3
SHC3Q92529 AC233992.3-201ENST00000607491 485 ntBASIC23.16■■□□□ 1.3
SHC3Q92529 AC110285.6-201ENST00000617652 491 ntBASIC23.16■■□□□ 1.3
SHC3Q92529 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC3Q92529 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHC3Q92529 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
SHC3Q92529 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.16■■□□□ 1.3
SHC3Q92529 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.16■■□□□ 1.3
SHC3Q92529 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
SHC3Q92529 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SHC3Q92529 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SHC3Q92529 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.15■■□□□ 1.3
SHC3Q92529 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.15■■□□□ 1.3
SHC3Q92529 AC106739.1-201ENST00000617035 715 ntBASIC23.15■■□□□ 1.3
SHC3Q92529 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.15■■□□□ 1.3
SHC3Q92529 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC3Q92529 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.15■■□□□ 1.3
SHC3Q92529 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHC3Q92529 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.14■■□□□ 1.3
SHC3Q92529 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHC3Q92529 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SHC3Q92529 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHC3Q92529 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHC3Q92529 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms