Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.332e-6■■■■□ 20.2
DDX59Q5T1V6 RIN2-205ENST00000467569 871 ntTSL 512.09□□□□□ -0.472e-6■■■■□ 20.2
DDX59Q5T1V6 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.642e-6■■■■□ 20.2
DDX59Q5T1V6 RIN2-203ENST00000459721 437 ntTSL 510.49□□□□□ -0.732e-6■■■■□ 20.2
DDX59Q5T1V6 RIN2-207ENST00000488077 462 ntTSL 56.6□□□□□ -1.352e-6■■■■□ 20.2
DDX59Q5T1V6 SHC2-205ENST00000590170 816 ntTSL 516.34■□□□□ 0.211e-6■■■■□ 20.2
DDX59Q5T1V6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-7■■■■□ 20.2
DDX59Q5T1V6 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-7■■■■□ 20.2
DDX59Q5T1V6 TRIM25-205ENST00000572021 1555 ntTSL 1 (best)10.86□□□□□ -0.672e-7■■■■□ 20.2
DDX59Q5T1V6 TRIM25-208ENST00000574234 471 ntTSL 24.23□□□□□ -1.732e-7■■■■□ 20.2
DDX59Q5T1V6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.713e-6■■■■□ 20.2
DDX59Q5T1V6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.353e-6■■■■□ 20.2
DDX59Q5T1V6 PRKCD-204ENST00000477794 404 ntTSL 316.43■□□□□ 0.223e-6■■■■□ 20.2
DDX59Q5T1V6 PRKCD-206ENST00000487897 562 ntTSL 415.27■□□□□ 0.043e-6■■■■□ 20.2
DDX59Q5T1V6 PRKCD-205ENST00000478843 589 ntTSL 48.37□□□□□ -1.073e-6■■■■□ 20.2
DDX59Q5T1V6 CHRD-212ENST00000470150 4234 ntTSL 213.44□□□□□ -0.265e-8■■■■□ 20.2
DDX59Q5T1V6 SHANK2-207ENST00000425049 557 ntTSL 414.86□□□□□ -0.034e-6■■■■□ 20.1
DDX59Q5T1V6 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.311e-6■■■■□ 20.1
DDX59Q5T1V6 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.34□□□□□ -1.071e-15■■■■□ 20.1
DDX59Q5T1V6 ACAA1-213ENST00000465181 656 ntTSL 311.18□□□□□ -0.628e-7■■■■□ 20.1
DDX59Q5T1V6 PRR36-201ENST00000615988 1261 ntAPPRIS ALT2 TSL 521.47■■□□□ 1.031e-6■■■■□ 20.1
DDX59Q5T1V6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.494e-34■■■■□ 20
DDX59Q5T1V6 PABPC1L-216ENST00000490798 1384 ntTSL 317.47■□□□□ 0.394e-34■■■■□ 20
DDX59Q5T1V6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.22■□□□□ 0.354e-34■■■■□ 20
DDX59Q5T1V6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.264e-34■■■■□ 20
DDX59Q5T1V6 PABPC1L-211ENST00000476056 1214 ntTSL 510.56□□□□□ -0.724e-34■■■■□ 20
DDX59Q5T1V6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.03■■□□□ 1.281e-6■■■■□ 20
DDX59Q5T1V6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.481e-6■■■■□ 20
DDX59Q5T1V6 KAZN-206ENST00000491547 5592 ntTSL 217.95■□□□□ 0.461e-6■■■■□ 20
DDX59Q5T1V6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.78■□□□□ 0.441e-6■■■■□ 20
DDX59Q5T1V6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.54■□□□□ 0.241e-6■■■■□ 20
DDX59Q5T1V6 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.31□□□□□ -0.281e-6■■■■□ 20
DDX59Q5T1V6 KAZN-202ENST00000376028 800 ntTSL 311.47□□□□□ -0.571e-6■■■■□ 20
DDX59Q5T1V6 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.952e-6■■■■□ 20
DDX59Q5T1V6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.712e-6■■■■□ 20
DDX59Q5T1V6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.952e-6■■■■□ 20
DDX59Q5T1V6 PRKACA-207ENST00000589284 403 ntTSL 515.89■□□□□ 0.135e-6■■■■□ 20
DDX59Q5T1V6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.472e-7■■■■□ 20
DDX59Q5T1V6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.382e-7■■■■□ 20
DDX59Q5T1V6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.382e-7■■■■□ 20
DDX59Q5T1V6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.382e-7■■■■□ 20
DDX59Q5T1V6 DHRSX-203ENST00000430536 490 ntTSL 218.69■□□□□ 0.587e-8■■■■□ 19.9
DDX59Q5T1V6 AGAP3-213ENST00000475145 413 ntTSL 210.44□□□□□ -0.745e-7■■■■□ 19.9
DDX59Q5T1V6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.065e-7■■■■□ 19.8
DDX59Q5T1V6 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.93e-7■■■■□ 19.8
DDX59Q5T1V6 FZR1-206ENST00000588327 675 ntTSL 321.71■■□□□ 1.073e-6■■■■□ 19.8
DDX59Q5T1V6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.353e-6■■■■□ 19.8
DDX59Q5T1V6 NLGN2-203ENST00000572893 305 ntTSL 322.63■■□□□ 1.214e-7■■■■□ 19.8
DDX59Q5T1V6 CHKB-210ENST00000484266 1401 ntTSL 230.02■■■□□ 2.41e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-207ENST00000476289 1010 ntTSL 528.96■■■□□ 2.231e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-205ENST00000468532 1052 ntTSL 528.06■■■□□ 2.081e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-212ENST00000492582 2069 ntTSL 227.66■■■□□ 2.021e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-208ENST00000479003 2114 ntTSL 226.34■■□□□ 1.811e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-CPT1B-203ENST00000492556 4906 ntTSL 220.54■□□□□ 0.881e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.651e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-209ENST00000481673 1856 ntTSL 1 (best)18.92■□□□□ 0.621e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-204ENST00000465842 428 ntTSL 217.07■□□□□ 0.321e-6■■■■□ 19.8
DDX59Q5T1V6 CHKB-202ENST00000463053 886 ntTSL 314.99□□□□□ -0.011e-6■■■■□ 19.8
DDX59Q5T1V6 MYO18A-224ENST00000636100 1564 ntTSL 524.43■■□□□ 1.51e-6■■■■□ 19.8
DDX59Q5T1V6 MYO18A-218ENST00000546105 1442 ntTSL 218.32■□□□□ 0.521e-6■■■■□ 19.8
DDX59Q5T1V6 MYO18A-205ENST00000529578 2667 ntTSL 212.76□□□□□ -0.371e-6■■■■□ 19.8
DDX59Q5T1V6 MYO18A-201ENST00000527312 573 ntTSL 29.35□□□□□ -0.911e-6■■■■□ 19.8
DDX59Q5T1V6 MYO18A-211ENST00000531438 565 ntTSL 48.99□□□□□ -0.971e-6■■■■□ 19.8
DDX59Q5T1V6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.453e-7■■■■□ 19.8
DDX59Q5T1V6 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.265e-8■■■■□ 19.8
DDX59Q5T1V6 CHRD-203ENST00000356534 1252 ntTSL 1 (best)18.4■□□□□ 0.542e-8■■■■□ 19.7
DDX59Q5T1V6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.562e-8■■■■□ 19.7
DDX59Q5T1V6 DENND1A-206ENST00000473039 4800 ntTSL 1 (best)11.18□□□□□ -0.622e-8■■■■□ 19.7
DDX59Q5T1V6 PHKG2-209ENST00000565924 908 ntTSL 319■□□□□ 0.633e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.27■□□□□ 0.353e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.033e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.013e-6■■■■□ 19.7
DDX59Q5T1V6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.19□□□□□ -0.143e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-207ENST00000564838 1618 ntTSL 214.14□□□□□ -0.153e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-208ENST00000565897 1068 ntTSL 513.94□□□□□ -0.183e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-205ENST00000563607 726 ntTSL 213.48□□□□□ -0.253e-6■■■■□ 19.7
DDX59Q5T1V6 PHKG2-206ENST00000563913 1791 ntTSL 513.39□□□□□ -0.273e-6■■■■□ 19.7
DDX59Q5T1V6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.51e-6■■■■□ 19.6
DDX59Q5T1V6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.79■□□□□ 0.281e-6■■■■□ 19.6
DDX59Q5T1V6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.191e-6■■■■□ 19.6
DDX59Q5T1V6 ISOC2-208ENST00000591718 786 ntTSL 215.61■□□□□ 0.091e-6■■■■□ 19.6
DDX59Q5T1V6 ISOC2-205ENST00000589080 763 ntTSL 213.42□□□□□ -0.261e-6■■■■□ 19.6
DDX59Q5T1V6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.052e-6■■■■□ 19.6
DDX59Q5T1V6 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.252e-6■■■■□ 19.6
DDX59Q5T1V6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 13e-6■■■■□ 19.6
DDX59Q5T1V6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.973e-6■■■■□ 19.6
DDX59Q5T1V6 TMEM259-205ENST00000586704 2538 ntTSL 517.24■□□□□ 0.353e-6■■■■□ 19.6
DDX59Q5T1V6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.331e-8■■■■□ 19.6
DDX59Q5T1V6 AC074143.1-201ENST00000580114 1287 ntAPPRIS P5 TSL 523.23■■□□□ 1.311e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.71■■□□□ 1.071e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.061e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.021e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.011e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.841e-8■■■■□ 19.6
DDX59Q5T1V6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.841e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.88■□□□□ 0.771e-8■■■■□ 19.6
DDX59Q5T1V6 AC074143.1-204ENST00000523360 499 ntTSL 417.36■□□□□ 0.371e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-209ENST00000596482 866 ntTSL 517.32■□□□□ 0.361e-8■■■■□ 19.6
DDX59Q5T1V6 HOMER3-208ENST00000595756 570 ntTSL 215.98■□□□□ 0.151e-8■■■■□ 19.6
DDX59Q5T1V6 AC074143.1-202ENST00000518753 501 ntAPPRIS ALT2 TSL 513.96□□□□□ -0.171e-8■■■■□ 19.6
Retrieved 100 of 7,289 protein–RNA pairs in 79.2 ms