RNA–Protein interactions for RNA: ENST00000473039.5

DENND1A-206, Transcript of DENN domain containing 1A, humanhuman

TSL 1 (best)

Gene DENND1A, Length 4,800 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-206ENST00000473039 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
DENND1A-206ENST00000473039 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
DENND1A-206ENST00000473039 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
DENND1A-206ENST00000473039 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
DENND1A-206ENST00000473039 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
DENND1A-206ENST00000473039 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
DENND1A-206ENST00000473039 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
DENND1A-206ENST00000473039 HRCP23327 699 aa18.01■□□□□ 0.47
DENND1A-206ENST00000473039 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
DENND1A-206ENST00000473039 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.45
DENND1A-206ENST00000473039 CENPBP07199 599 aaPredicted RBP17.76■□□□□ 0.43
DENND1A-206ENST00000473039 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
DENND1A-206ENST00000473039 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.42
DENND1A-206ENST00000473039 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
DENND1A-206ENST00000473039 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
DENND1A-206ENST00000473039 MYT1Q01538 1121 aa17.6■□□□□ 0.41
DENND1A-206ENST00000473039 ABCC9O60706 1549 aa17.59■□□□□ 0.41
DENND1A-206ENST00000473039 PPARGC1BQ86YN6 1023 aaKnown RBP17.58■□□□□ 0.41
DENND1A-206ENST00000473039 TTBK1Q5TCY1 1321 aaPredicted RBP17.54■□□□□ 0.4
DENND1A-206ENST00000473039 APLP2Q06481 763 aa17.52■□□□□ 0.4
DENND1A-206ENST00000473039 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
DENND1A-206ENST00000473039 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
DENND1A-206ENST00000473039 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
DENND1A-206ENST00000473039 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
DENND1A-206ENST00000473039 RANGAP1P46060 587 aaPredicted RBP17.06■□□□□ 0.32
DENND1A-206ENST00000473039 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
DENND1A-206ENST00000473039 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
DENND1A-206ENST00000473039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
DENND1A-206ENST00000473039 NEFLP07196 543 aa16.97■□□□□ 0.31
DENND1A-206ENST00000473039 GTF3C3Q9Y5Q9 886 aa16.92■□□□□ 0.3
DENND1A-206ENST00000473039 ACIN1Q9UKV3 1341 aaKnown RBP16.84■□□□□ 0.29
DENND1A-206ENST00000473039 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.29
DENND1A-206ENST00000473039 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.29
DENND1A-206ENST00000473039 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
DENND1A-206ENST00000473039 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
DENND1A-206ENST00000473039 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
DENND1A-206ENST00000473039 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
DENND1A-206ENST00000473039 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
DENND1A-206ENST00000473039 ITGAEP38570 1179 aa16.59■□□□□ 0.25
DENND1A-206ENST00000473039 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
DENND1A-206ENST00000473039 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
DENND1A-206ENST00000473039 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
DENND1A-206ENST00000473039 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
DENND1A-206ENST00000473039 BCANQ96GW7 911 aa16.39■□□□□ 0.21
DENND1A-206ENST00000473039 NACADO15069 1562 aa16.32■□□□□ 0.2
DENND1A-206ENST00000473039 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
DENND1A-206ENST00000473039 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
DENND1A-206ENST00000473039 ANP32CO43423 234 aa16.21■□□□□ 0.19
DENND1A-206ENST00000473039 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
DENND1A-206ENST00000473039 FAM50AQ14320 339 aaKnown RBP16.19■□□□□ 0.18
DENND1A-206ENST00000473039 MIER1Q8N108 512 aa16.19■□□□□ 0.18
DENND1A-206ENST00000473039 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
DENND1A-206ENST00000473039 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
DENND1A-206ENST00000473039 DAXXQ9UER7 740 aaPredicted RBP16.18■□□□□ 0.18
DENND1A-206ENST00000473039 FBLN2P98095 1184 aa16.13■□□□□ 0.17
DENND1A-206ENST00000473039 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
DENND1A-206ENST00000473039 FKBP8Q14318 412 aa16.1■□□□□ 0.17
DENND1A-206ENST00000473039 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
DENND1A-206ENST00000473039 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
DENND1A-206ENST00000473039 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
DENND1A-206ENST00000473039 TRIM52Q96A61 297 aa15.96■□□□□ 0.15
DENND1A-206ENST00000473039 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
DENND1A-206ENST00000473039 ANP32EQ9BTT0 268 aa15.89■□□□□ 0.13
DENND1A-206ENST00000473039 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
DENND1A-206ENST00000473039 ANP32AP39687 249 aaKnown RBP15.86■□□□□ 0.13
DENND1A-206ENST00000473039 CLIP1P30622 1438 aa15.84■□□□□ 0.13
DENND1A-206ENST00000473039 BAZ1BQ9UIG0 1483 aaKnown RBP15.83■□□□□ 0.12
DENND1A-206ENST00000473039 EEA1Q15075 1411 aa15.82■□□□□ 0.12
DENND1A-206ENST00000473039 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
DENND1A-206ENST00000473039 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
DENND1A-206ENST00000473039 SUPT16HQ9Y5B9 1047 aaKnown RBP15.79■□□□□ 0.12
DENND1A-206ENST00000473039 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
DENND1A-206ENST00000473039 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
DENND1A-206ENST00000473039 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
DENND1A-206ENST00000473039 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
DENND1A-206ENST00000473039 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
DENND1A-206ENST00000473039 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
DENND1A-206ENST00000473039 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
DENND1A-206ENST00000473039 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
DENND1A-206ENST00000473039 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
DENND1A-206ENST00000473039 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
DENND1A-206ENST00000473039 NBR1Q14596 966 aa15.66■□□□□ 0.1
DENND1A-206ENST00000473039 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
DENND1A-206ENST00000473039 CCDC136Q96JN2 1154 aa15.63■□□□□ 0.09
DENND1A-206ENST00000473039 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
DENND1A-206ENST00000473039 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
DENND1A-206ENST00000473039 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
DENND1A-206ENST00000473039 MRS2Q9HD23 443 aa15.6■□□□□ 0.09
DENND1A-206ENST00000473039 WRNQ14191 1432 aaPredicted RBP eCLIP15.59■□□□□ 0.09
DENND1A-206ENST00000473039 BCL11AQ9H165 835 aa15.57■□□□□ 0.08
DENND1A-206ENST00000473039 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
DENND1A-206ENST00000473039 SOGA1O94964 1423 aa15.54■□□□□ 0.08
DENND1A-206ENST00000473039 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
DENND1A-206ENST00000473039 TSHZ2Q9NRE2 1034 aa15.53■□□□□ 0.08
DENND1A-206ENST00000473039 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.07
DENND1A-206ENST00000473039 RBM19Q9Y4C8 960 aaKnown RBP15.51■□□□□ 0.07
DENND1A-206ENST00000473039 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
DENND1A-206ENST00000473039 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
DENND1A-206ENST00000473039 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
DENND1A-206ENST00000473039 TMC1Q8TDI8 760 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms