Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.83■■□□□ 1.41
NCKAP1LP55160 AL354811.1-201ENST00000610286 706 ntBASIC23.83■■□□□ 1.41
NCKAP1LP55160 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
NCKAP1LP55160 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1LP55160 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCKAP1LP55160 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.83■■□□□ 1.41
NCKAP1LP55160 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NCKAP1LP55160 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
NCKAP1LP55160 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
NCKAP1LP55160 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NCKAP1LP55160 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.82■■□□□ 1.4
NCKAP1LP55160 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.82■■□□□ 1.4
NCKAP1LP55160 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
NCKAP1LP55160 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 AC242852.2-201ENST00000615738 1807 ntBASIC23.82■■□□□ 1.4
NCKAP1LP55160 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCKAP1LP55160 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1LP55160 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1LP55160 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.81■■□□□ 1.4
NCKAP1LP55160 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NCKAP1LP55160 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.81■■□□□ 1.4
NCKAP1LP55160 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.81■■□□□ 1.4
NCKAP1LP55160 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1LP55160 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1LP55160 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCKAP1LP55160 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
NCKAP1LP55160 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.8■■□□□ 1.4
NCKAP1LP55160 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NCKAP1LP55160 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 MIR6084-201ENST00000622012 110 ntBASIC23.79■■□□□ 1.4
NCKAP1LP55160 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.79■■□□□ 1.4
NCKAP1LP55160 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCKAP1LP55160 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1LP55160 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1LP55160 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1LP55160 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1LP55160 AC027612.3-201ENST00000413684 1047 ntBASIC23.78■■□□□ 1.4
NCKAP1LP55160 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1LP55160 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.78■■□□□ 1.4
NCKAP1LP55160 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.78■■□□□ 1.4
NCKAP1LP55160 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
NCKAP1LP55160 ECEL1P1-201ENST00000373592 1742 ntBASIC23.78■■□□□ 1.4
NCKAP1LP55160 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCKAP1LP55160 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.78■■□□□ 1.4
NCKAP1LP55160 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.77■■□□□ 1.4
NCKAP1LP55160 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.77■■□□□ 1.4
NCKAP1LP55160 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.77■■□□□ 1.4
NCKAP1LP55160 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCKAP1LP55160 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1LP55160 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.76■■□□□ 1.39
NCKAP1LP55160 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1LP55160 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.76■■□□□ 1.39
NCKAP1LP55160 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.76■■□□□ 1.39
NCKAP1LP55160 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1LP55160 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1LP55160 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1LP55160 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCKAP1LP55160 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms