Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RAB5CP51148 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB5CP51148 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAB5CP51148 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB5CP51148 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RAB5CP51148 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB5CP51148 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5CP51148 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB5CP51148 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB5CP51148 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB5CP51148 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAB5CP51148 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
RAB5CP51148 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RAB5CP51148 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.39■□□□□ 0.38
RAB5CP51148 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RAB5CP51148 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB5CP51148 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB5CP51148 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB5CP51148 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB5CP51148 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5CP51148 LINC01006-201ENST00000333319 2292 ntBASIC17.38■□□□□ 0.37
RAB5CP51148 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB5CP51148 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB5CP51148 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB5CP51148 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB5CP51148 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB5CP51148 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB5CP51148 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB5CP51148 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5CP51148 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB5CP51148 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 AC131274.2-201ENST00000580697 1507 ntBASIC17.37■□□□□ 0.37
RAB5CP51148 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RAB5CP51148 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB5CP51148 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB5CP51148 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB5CP51148 AC093536.1-201ENST00000569153 554 ntBASIC17.37■□□□□ 0.37
RAB5CP51148 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB5CP51148 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB5CP51148 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RAB5CP51148 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
RAB5CP51148 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5CP51148 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 AC144652.1-201ENST00000609974 1624 ntBASIC17.36■□□□□ 0.37
RAB5CP51148 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB5CP51148 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB5CP51148 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms