Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX1P47902 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDX1P47902 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX1P47902 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDX1P47902 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDX1P47902 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDX1P47902 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDX1P47902 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDX1P47902 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.53■□□□□ 0.4
CDX1P47902 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 AC106739.1-201ENST00000617035 715 ntBASIC17.53■□□□□ 0.4
CDX1P47902 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDX1P47902 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX1P47902 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDX1P47902 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.52■□□□□ 0.4
CDX1P47902 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDX1P47902 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
CDX1P47902 PBX2P1-201ENST00000493219 1291 ntBASIC17.52■□□□□ 0.4
CDX1P47902 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.52■□□□□ 0.4
CDX1P47902 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDX1P47902 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDX1P47902 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.52■□□□□ 0.39
CDX1P47902 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDX1P47902 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.52■□□□□ 0.39
CDX1P47902 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.51■□□□□ 0.39
CDX1P47902 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.51■□□□□ 0.39
CDX1P47902 AL136162.1-201ENST00000607711 1078 ntBASIC17.51■□□□□ 0.39
CDX1P47902 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 SYT6-210ENST00000641643 1587 ntBASIC17.51■□□□□ 0.39
CDX1P47902 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDX1P47902 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDX1P47902 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX1P47902 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDX1P47902 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDX1P47902 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.5■□□□□ 0.39
CDX1P47902 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.5■□□□□ 0.39
CDX1P47902 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.5■□□□□ 0.39
CDX1P47902 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDX1P47902 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.5■□□□□ 0.39
CDX1P47902 AC099791.2-201ENST00000605725 427 ntBASIC17.5■□□□□ 0.39
CDX1P47902 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX1P47902 AC135279.3-201ENST00000610945 1311 ntBASIC17.49■□□□□ 0.39
CDX1P47902 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDX1P47902 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDX1P47902 AC005837.3-201ENST00000612163 286 ntBASIC17.49■□□□□ 0.39
CDX1P47902 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX1P47902 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDX1P47902 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX1P47902 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX1P47902 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDX1P47902 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDX1P47902 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDX1P47902 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.48■□□□□ 0.39
CDX1P47902 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.48■□□□□ 0.39
CDX1P47902 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.48■□□□□ 0.39
CDX1P47902 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.48■□□□□ 0.39
CDX1P47902 AL138724.1-201ENST00000606771 1088 ntBASIC17.48■□□□□ 0.39
CDX1P47902 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX1P47902 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms