Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DHFRP00374 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DHFRP00374 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.71■□□□□ 0.59
DHFRP00374 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DHFRP00374 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DHFRP00374 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
DHFRP00374 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DHFRP00374 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DHFRP00374 ALDH1A3-203ENST00000557963 1670 ntBASIC18.7■□□□□ 0.58
DHFRP00374 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DHFRP00374 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.7■□□□□ 0.58
DHFRP00374 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DHFRP00374 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DHFRP00374 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.7■□□□□ 0.58
DHFRP00374 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DHFRP00374 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.69■□□□□ 0.58
DHFRP00374 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DHFRP00374 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.69■□□□□ 0.58
DHFRP00374 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DHFRP00374 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.68■□□□□ 0.58
DHFRP00374 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DHFRP00374 RARRES2P2-201ENST00000394842 485 ntBASIC18.68■□□□□ 0.58
DHFRP00374 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DHFRP00374 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DHFRP00374 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DHFRP00374 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DHFRP00374 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DHFRP00374 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DHFRP00374 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.68■□□□□ 0.58
DHFRP00374 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DHFRP00374 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DHFRP00374 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
DHFRP00374 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DHFRP00374 AC090877.2-201ENST00000558441 1738 ntBASIC18.67■□□□□ 0.58
DHFRP00374 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.67■□□□□ 0.58
DHFRP00374 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.67■□□□□ 0.58
DHFRP00374 HSD17B1P1-201ENST00000590052 955 ntBASIC18.67■□□□□ 0.58
DHFRP00374 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.67■□□□□ 0.58
DHFRP00374 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 AC009831.1-201ENST00000580420 1582 ntBASIC18.67■□□□□ 0.58
DHFRP00374 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DHFRP00374 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DHFRP00374 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
DHFRP00374 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DHFRP00374 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DHFRP00374 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DHFRP00374 AC138932.1-201ENST00000534164 6830 ntBASIC18.66■□□□□ 0.58
DHFRP00374 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
DHFRP00374 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DHFRP00374 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DHFRP00374 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
DHFRP00374 AC018755.3-202ENST00000596210 929 ntBASIC18.66■□□□□ 0.58
DHFRP00374 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DHFRP00374 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.66■□□□□ 0.58
DHFRP00374 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DHFRP00374 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
DHFRP00374 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
DHFRP00374 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DHFRP00374 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DHFRP00374 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DHFRP00374 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DHFRP00374 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
DHFRP00374 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
DHFRP00374 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.64■□□□□ 0.57
DHFRP00374 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DHFRP00374 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.64■□□□□ 0.57
DHFRP00374 AL391422.3-201ENST00000603791 2761 ntBASIC18.64■□□□□ 0.57
DHFRP00374 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms