Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
C1QTNF9BB2RNN3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C1QTNF9BB2RNN3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
C1QTNF9BB2RNN3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C1QTNF9BB2RNN3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
C1QTNF9BB2RNN3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
C1QTNF9BB2RNN3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 MIR718-201ENST00000390190 70 ntBASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 AC093787.1-201ENST00000450396 207 ntBASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 MYC-209ENST00000641252 345 ntBASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C1QTNF9BB2RNN3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 BX276092.2-201ENST00000417668 665 ntBASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.58■□□□□ 0.89
C1QTNF9BB2RNN3 AC068338.2-201ENST00000563278 1430 ntBASIC20.58■□□□□ 0.88
C1QTNF9BB2RNN3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C1QTNF9BB2RNN3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 AC005224.4-201ENST00000583262 1652 ntBASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
C1QTNF9BB2RNN3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 AC026366.1-201ENST00000488803 879 ntBASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 UNC93B5-201ENST00000530315 699 ntBASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 AL359736.2-201ENST00000621992 437 ntBASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 AC013268.1-206ENST00000638368 961 ntBASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 AC112229.1-201ENST00000639295 961 ntBASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 AC068587.7-201ENST00000641602 218 ntBASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C1QTNF9BB2RNN3 AC145676.1-201ENST00000514988 2004 ntBASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 AC010141.3-201ENST00000456659 717 ntBASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF9BB2RNN3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms