Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV13-1A0A0B4J241 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV13-1A0A0B4J241 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.05■□□□□ 0
TRAV13-1A0A0B4J241 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV13-1A0A0B4J241 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 LINC01960-201ENST00000563759 1884 ntBASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TRAV13-1A0A0B4J241 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.04■□□□□ -0
TRAV13-1A0A0B4J241 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 AC005703.6-201ENST00000623265 1329 ntBASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV13-1A0A0B4J241 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 KRT8P33-201ENST00000508125 1423 ntBASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 FAM99A-202ENST00000538190 1989 ntBASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 YBX1P4-201ENST00000392794 808 ntBASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 MIR4508-201ENST00000584178 70 ntBASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.02■□□□□ -0
TRAV13-1A0A0B4J241 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV13-1A0A0B4J241 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV13-1A0A0B4J241 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms