Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 AC103834.1-201ENST00000520383 144 ntBASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV9-2A0A087WT02 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 AC103724.3-201ENST00000564481 992 ntBASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV9-2A0A087WT02 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-2A0A087WT02 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-2A0A087WT02 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV9-2A0A087WT02 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV9-2A0A087WT02 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-2A0A087WT02 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-2A0A087WT02 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRAV9-2A0A087WT02 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 AC011551.1-201ENST00000614101 683 ntBASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV9-2A0A087WT02 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 AC080038.3-201ENST00000623346 1952 ntBASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16■□□□□ 0.15
TRAV9-2A0A087WT02 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-2A0A087WT02 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms