Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 XPNPEP1-203ENST00000369683 2344 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 PRIMPOL-209ENST00000512834 2174 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 GNA13-202ENST00000541118 1502 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 LINC01149-202ENST00000430364 2141 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 PAX6-258ENST00000639548 1417 ntTSL 5 BASIC12.98□□□□□ -0.33
SLC1A1P43005 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC12.98□□□□□ -0.33
SLC1A1P43005 PLIN5-206ENST00000592610 1903 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SLC1A1P43005 CETN3-201ENST00000283122 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SLC1A1P43005 ENPP7P8-202ENST00000527856 1345 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC12.98□□□□□ -0.33
SLC1A1P43005 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC12.98□□□□□ -0.33
SLC1A1P43005 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 DNM1P46-202ENST00000415963 882 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.98□□□□□ -0.33
SLC1A1P43005 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC12.98□□□□□ -0.33
SLC1A1P43005 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.98□□□□□ -0.33
SLC1A1P43005 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC12.98□□□□□ -0.33
SLC1A1P43005 AC131235.2-201ENST00000445553 1057 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 TREX1-203ENST00000456089 629 ntTSL 3 BASIC12.98□□□□□ -0.33
SLC1A1P43005 LDHAL6CP-201ENST00000502352 1142 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.98□□□□□ -0.33
SLC1A1P43005 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 AL606495.2-201ENST00000605867 535 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 AL354674.1-201ENST00000585222 1780 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
SLC1A1P43005 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 CICP26-201ENST00000425003 2448 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
SLC1A1P43005 AC027020.2-201ENST00000602585 2389 ntBASIC12.98□□□□□ -0.33
SLC1A1P43005 TAF5L-203ENST00000366675 4062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC1A1P43005 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC12.98□□□□□ -0.33
SLC1A1P43005 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 FAM71F1-201ENST00000315184 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC12.97□□□□□ -0.33
SLC1A1P43005 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
SLC1A1P43005 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SLC1A1P43005 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 AL357054.1-201ENST00000407035 1227 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 AL139156.2-201ENST00000414059 340 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 ACTG1P12-201ENST00000423183 1166 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 AL929302.1-201ENST00000426556 871 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.97□□□□□ -0.33
SLC1A1P43005 AKR1C6P-201ENST00000432950 983 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 HNRNPA1P3-201ENST00000440968 551 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC12.97□□□□□ -0.33
SLC1A1P43005 MARK2P17-201ENST00000498560 841 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.97□□□□□ -0.33
SLC1A1P43005 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC12.97□□□□□ -0.33
SLC1A1P43005 AL645949.2-201ENST00000513434 786 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 AP000812.3-201ENST00000544535 609 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms