RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
PAX6-258ENST00000639548 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
PAX6-258ENST00000639548 ABCC9O60706 1549 aa23.46■■□□□ 1.35
PAX6-258ENST00000639548 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
PAX6-258ENST00000639548 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
PAX6-258ENST00000639548 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.17
PAX6-258ENST00000639548 NACADO15069 1562 aa22.27■■□□□ 1.16
PAX6-258ENST00000639548 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
PAX6-258ENST00000639548 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
PAX6-258ENST00000639548 SHROOM4Q9ULL8 1493 aa22.01■■□□□ 1.11
PAX6-258ENST00000639548 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
PAX6-258ENST00000639548 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
PAX6-258ENST00000639548 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
PAX6-258ENST00000639548 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
PAX6-258ENST00000639548 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
PAX6-258ENST00000639548 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
PAX6-258ENST00000639548 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
PAX6-258ENST00000639548 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
PAX6-258ENST00000639548 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
PAX6-258ENST00000639548 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
PAX6-258ENST00000639548 BAZ1AQ9NRL2 1556 aaPredicted RBP20.94■□□□□ 0.94
PAX6-258ENST00000639548 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
PAX6-258ENST00000639548 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
PAX6-258ENST00000639548 WIZO95785 1651 aa20.74■□□□□ 0.91
PAX6-258ENST00000639548 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
PAX6-258ENST00000639548 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
PAX6-258ENST00000639548 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
PAX6-258ENST00000639548 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
PAX6-258ENST00000639548 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
PAX6-258ENST00000639548 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
PAX6-258ENST00000639548 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
PAX6-258ENST00000639548 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.84
PAX6-258ENST00000639548 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
PAX6-258ENST00000639548 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
PAX6-258ENST00000639548 CUX2O14529 1486 aa20.23■□□□□ 0.83
PAX6-258ENST00000639548 NESP48681 1621 aa20.19■□□□□ 0.82
PAX6-258ENST00000639548 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
PAX6-258ENST00000639548 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
PAX6-258ENST00000639548 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.8
PAX6-258ENST00000639548 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
PAX6-258ENST00000639548 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
PAX6-258ENST00000639548 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
PAX6-258ENST00000639548 KIF21AQ7Z4S6 1674 aa19.93■□□□□ 0.78
PAX6-258ENST00000639548 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
PAX6-258ENST00000639548 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
PAX6-258ENST00000639548 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
PAX6-258ENST00000639548 EEA1Q15075 1411 aa19.8■□□□□ 0.76
PAX6-258ENST00000639548 CFTRP13569 1480 aa19.79■□□□□ 0.76
PAX6-258ENST00000639548 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
PAX6-258ENST00000639548 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
PAX6-258ENST00000639548 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
PAX6-258ENST00000639548 WDR62O43379 1518 aa19.74■□□□□ 0.75
PAX6-258ENST00000639548 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
PAX6-258ENST00000639548 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
PAX6-258ENST00000639548 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
PAX6-258ENST00000639548 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
PAX6-258ENST00000639548 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
PAX6-258ENST00000639548 SOGA1O94964 1423 aa19.6■□□□□ 0.73
PAX6-258ENST00000639548 CUX1P39880 1505 aa19.53■□□□□ 0.72
PAX6-258ENST00000639548 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
PAX6-258ENST00000639548 KIF21BO75037 1637 aa19.52■□□□□ 0.72
PAX6-258ENST00000639548 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
PAX6-258ENST00000639548 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
PAX6-258ENST00000639548 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
PAX6-258ENST00000639548 TNIKQ9UKE5 1360 aa19.45■□□□□ 0.7
PAX6-258ENST00000639548 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
PAX6-258ENST00000639548 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
PAX6-258ENST00000639548 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
PAX6-258ENST00000639548 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
PAX6-258ENST00000639548 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
PAX6-258ENST00000639548 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
PAX6-258ENST00000639548 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
PAX6-258ENST00000639548 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
PAX6-258ENST00000639548 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
PAX6-258ENST00000639548 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.67
PAX6-258ENST00000639548 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
PAX6-258ENST00000639548 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
PAX6-258ENST00000639548 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
PAX6-258ENST00000639548 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
PAX6-258ENST00000639548 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
PAX6-258ENST00000639548 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
PAX6-258ENST00000639548 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
PAX6-258ENST00000639548 POLA1P09884 1462 aaPredicted RBP19.15■□□□□ 0.66
PAX6-258ENST00000639548 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
PAX6-258ENST00000639548 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
PAX6-258ENST00000639548 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.65
PAX6-258ENST00000639548 CLIP1P30622 1438 aa19.09■□□□□ 0.65
PAX6-258ENST00000639548 IGF1RP08069 1367 aa19.09■□□□□ 0.65
PAX6-258ENST00000639548 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
PAX6-258ENST00000639548 CUL7Q14999 1698 aa19.05■□□□□ 0.64
PAX6-258ENST00000639548 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
PAX6-258ENST00000639548 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
PAX6-258ENST00000639548 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
PAX6-258ENST00000639548 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.63
PAX6-258ENST00000639548 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
PAX6-258ENST00000639548 ARHGEF11O15085 1522 aa19■□□□□ 0.63
PAX6-258ENST00000639548 CHD1O14646 1710 aa19■□□□□ 0.63
PAX6-258ENST00000639548 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
PAX6-258ENST00000639548 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
PAX6-258ENST00000639548 FBLN2P98095 1184 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms