Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 LINC01304-201ENST00000425949 1475 ntTSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 AC004585.2-201ENST00000624090 1473 ntBASIC13.05□□□□□ -0.32
SLC1A1P43005 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 CASP7-210ENST00000614447 2555 ntTSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 GK-207ENST00000427190 4573 ntTSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 MAMLD1-205ENST00000432680 3224 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 RN7SKP20-201ENST00000362752 313 ntBASIC13.05□□□□□ -0.32
SLC1A1P43005 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC13.05□□□□□ -0.32
SLC1A1P43005 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
SLC1A1P43005 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC13.05□□□□□ -0.32
SLC1A1P43005 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC13.05□□□□□ -0.32
SLC1A1P43005 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC13.05□□□□□ -0.32
SLC1A1P43005 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 AC092896.1-201ENST00000465850 380 ntBASIC13.05□□□□□ -0.32
SLC1A1P43005 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 LMO3-228ENST00000541846 573 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
SLC1A1P43005 AC126471.1-201ENST00000550676 362 ntBASIC13.05□□□□□ -0.32
SLC1A1P43005 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC13.05□□□□□ -0.32
SLC1A1P43005 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 ZNF667-AS1-203ENST00000586822 468 ntTSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.05□□□□□ -0.32
SLC1A1P43005 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SLC1A1P43005 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SLC1A1P43005 QARS-202ENST00000414533 2412 ntTSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 RASGEF1B-201ENST00000264400 2277 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 DPYD-201ENST00000306031 1779 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 C10orf128-201ENST00000374148 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 ETF1-202ENST00000499810 3874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 ASB9-201ENST00000380483 1612 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AF274858.1-201ENST00000406288 372 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.04□□□□□ -0.32
SLC1A1P43005 RPL17P11-201ENST00000417593 544 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 AC079325.1-201ENST00000430386 857 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 LINC02105-202ENST00000511953 870 ntTSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AC104066.1-201ENST00000512377 751 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 URB1-AS1-201ENST00000534991 831 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 GRAMD4P6-201ENST00000556999 244 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 RN7SL190P-201ENST00000582519 257 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
SLC1A1P43005 MIR7845-201ENST00000618396 99 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 FAM81A-201ENST00000288228 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms