RNA–Protein interactions for RNA: ENST00000374051.7

NLGN3-202, Transcript of neuroligin 3, humanhuman

TSL 1 (best) BASIC

Gene NLGN3, Length 3,913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-202ENST00000374051 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
NLGN3-202ENST00000374051 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
NLGN3-202ENST00000374051 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
NLGN3-202ENST00000374051 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
NLGN3-202ENST00000374051 EHMT2Q96KQ7 1210 aa20.59■□□□□ 0.89
NLGN3-202ENST00000374051 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
NLGN3-202ENST00000374051 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
NLGN3-202ENST00000374051 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
NLGN3-202ENST00000374051 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
NLGN3-202ENST00000374051 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
NLGN3-202ENST00000374051 HRCP23327 699 aa19.88■□□□□ 0.77
NLGN3-202ENST00000374051 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
NLGN3-202ENST00000374051 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
NLGN3-202ENST00000374051 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
NLGN3-202ENST00000374051 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
NLGN3-202ENST00000374051 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.68
NLGN3-202ENST00000374051 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
NLGN3-202ENST00000374051 ZEB1P37275 1124 aaPredicted RBP19.17■□□□□ 0.66
NLGN3-202ENST00000374051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.66
NLGN3-202ENST00000374051 YTHDC1Q96MU7 727 aaKnown RBP19.1■□□□□ 0.65
NLGN3-202ENST00000374051 UBTFP17480 764 aaKnown RBP19.07■□□□□ 0.64
NLGN3-202ENST00000374051 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
NLGN3-202ENST00000374051 APLP2Q06481 763 aa18.93■□□□□ 0.62
NLGN3-202ENST00000374051 CENPBP07199 599 aaPredicted RBP18.85■□□□□ 0.61
NLGN3-202ENST00000374051 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
NLGN3-202ENST00000374051 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
NLGN3-202ENST00000374051 ABCC9O60706 1549 aa18.69■□□□□ 0.58
NLGN3-202ENST00000374051 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
NLGN3-202ENST00000374051 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
NLGN3-202ENST00000374051 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
NLGN3-202ENST00000374051 ITGAEP38570 1179 aa18.61■□□□□ 0.57
NLGN3-202ENST00000374051 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
NLGN3-202ENST00000374051 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
NLGN3-202ENST00000374051 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
NLGN3-202ENST00000374051 SCRIBQ14160 1630 aa18.52■□□□□ 0.56
NLGN3-202ENST00000374051 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
NLGN3-202ENST00000374051 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
NLGN3-202ENST00000374051 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
NLGN3-202ENST00000374051 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.52
NLGN3-202ENST00000374051 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
NLGN3-202ENST00000374051 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.51
NLGN3-202ENST00000374051 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
NLGN3-202ENST00000374051 BCANQ96GW7 911 aa18.14■□□□□ 0.49
NLGN3-202ENST00000374051 MIER1Q8N108 512 aa18.13■□□□□ 0.49
NLGN3-202ENST00000374051 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
NLGN3-202ENST00000374051 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.49
NLGN3-202ENST00000374051 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
NLGN3-202ENST00000374051 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
NLGN3-202ENST00000374051 NEFLP07196 543 aa17.96■□□□□ 0.47
NLGN3-202ENST00000374051 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
NLGN3-202ENST00000374051 SOGA1O94964 1423 aa17.91■□□□□ 0.46
NLGN3-202ENST00000374051 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
NLGN3-202ENST00000374051 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
NLGN3-202ENST00000374051 POLR3GLQ9BT43 218 aa17.85■□□□□ 0.45
NLGN3-202ENST00000374051 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
NLGN3-202ENST00000374051 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
NLGN3-202ENST00000374051 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
NLGN3-202ENST00000374051 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
NLGN3-202ENST00000374051 MYT1Q01538 1121 aa17.75■□□□□ 0.43
NLGN3-202ENST00000374051 CLIP1P30622 1438 aa17.75■□□□□ 0.43
NLGN3-202ENST00000374051 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
NLGN3-202ENST00000374051 TRIM52Q96A61 297 aa17.7■□□□□ 0.42
NLGN3-202ENST00000374051 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
NLGN3-202ENST00000374051 WIZO95785 1651 aa17.68■□□□□ 0.42
NLGN3-202ENST00000374051 FKBP8Q14318 412 aa17.67■□□□□ 0.42
NLGN3-202ENST00000374051 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
NLGN3-202ENST00000374051 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
NLGN3-202ENST00000374051 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
NLGN3-202ENST00000374051 ANP32CO43423 234 aa17.58■□□□□ 0.41
NLGN3-202ENST00000374051 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.4
NLGN3-202ENST00000374051 IRX6P78412 446 aaPredicted RBP17.55■□□□□ 0.4
NLGN3-202ENST00000374051 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
NLGN3-202ENST00000374051 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
NLGN3-202ENST00000374051 ZNF326Q5BKZ1 582 aaKnown RBP17.52■□□□□ 0.4
NLGN3-202ENST00000374051 KCNH8Q96L42 1107 aa17.49■□□□□ 0.39
NLGN3-202ENST00000374051 NACADO15069 1562 aa17.49■□□□□ 0.39
NLGN3-202ENST00000374051 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
NLGN3-202ENST00000374051 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
NLGN3-202ENST00000374051 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
NLGN3-202ENST00000374051 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
NLGN3-202ENST00000374051 EEA1Q15075 1411 aa17.43■□□□□ 0.38
NLGN3-202ENST00000374051 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
NLGN3-202ENST00000374051 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
NLGN3-202ENST00000374051 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
NLGN3-202ENST00000374051 VPS8Q8N3P4 1428 aa17.33■□□□□ 0.36
NLGN3-202ENST00000374051 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
NLGN3-202ENST00000374051 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
NLGN3-202ENST00000374051 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
NLGN3-202ENST00000374051 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
NLGN3-202ENST00000374051 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
NLGN3-202ENST00000374051 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
NLGN3-202ENST00000374051 FBLN2P98095 1184 aa17.24■□□□□ 0.35
NLGN3-202ENST00000374051 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
NLGN3-202ENST00000374051 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
NLGN3-202ENST00000374051 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
NLGN3-202ENST00000374051 TSHZ2Q9NRE2 1034 aa17.18■□□□□ 0.34
NLGN3-202ENST00000374051 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
NLGN3-202ENST00000374051 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
NLGN3-202ENST00000374051 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
NLGN3-202ENST00000374051 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms