Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.1□□□□□ -0.31
MTHFRP42898 AOC4P-203ENST00000566825 2289 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AL606760.3-201ENST00000569869 3591 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC110048.1-201ENST00000604293 2157 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 DDX12P-201ENST00000432996 2947 ntBASIC13.09□□□□□ -0.31
MTHFRP42898 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 C10orf99-201ENST00000372126 888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC13.09□□□□□ -0.31
MTHFRP42898 RPL23-207ENST00000577407 615 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 ZNF226-212ENST00000588795 641 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC13.09□□□□□ -0.31
MTHFRP42898 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
MTHFRP42898 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 AC092123.2-201ENST00000611189 5421 ntBASIC13.09□□□□□ -0.31
MTHFRP42898 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 AMD1P4-201ENST00000299540 1345 ntBASIC13.09□□□□□ -0.31
MTHFRP42898 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MTHFRP42898 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
MTHFRP42898 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MTHFRP42898 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MTHFRP42898 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MTHFRP42898 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC13.08□□□□□ -0.31
MTHFRP42898 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC13.08□□□□□ -0.31
MTHFRP42898 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC13.08□□□□□ -0.32
MTHFRP42898 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MTHFRP42898 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MTHFRP42898 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
MTHFRP42898 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MTHFRP42898 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 LST1-206ENST00000376090 689 ntTSL 2 BASIC13.08□□□□□ -0.32
MTHFRP42898 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 LST1-210ENST00000376099 610 ntTSL 2 BASIC13.08□□□□□ -0.32
MTHFRP42898 THUMPD1P1-201ENST00000400014 1041 ntBASIC13.08□□□□□ -0.32
MTHFRP42898 AC005587.1-201ENST00000401879 592 ntBASIC13.08□□□□□ -0.32
MTHFRP42898 AK4P5-201ENST00000404520 634 ntBASIC13.08□□□□□ -0.32
MTHFRP42898 MIR1249-201ENST00000408671 66 ntBASIC13.08□□□□□ -0.32
MTHFRP42898 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.08□□□□□ -0.32
MTHFRP42898 LST1-214ENST00000418507 726 ntTSL 2 BASIC13.08□□□□□ -0.32
MTHFRP42898 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MTHFRP42898 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC13.08□□□□□ -0.32
MTHFRP42898 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC13.08□□□□□ -0.32
MTHFRP42898 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.08□□□□□ -0.32
MTHFRP42898 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC13.08□□□□□ -0.32
MTHFRP42898 RN7SL265P-201ENST00000486808 300 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms