Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RPSAP61-201ENST00000412542 878 ntBASIC13.28□□□□□ -0.28
LMO3Q8TAP4 RPL13AP5-201ENST00000439189 612 ntBASIC13.28□□□□□ -0.28
LMO3Q8TAP4 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AL353708.1-201ENST00000567904 1257 ntBASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 SHROOM2P1-201ENST00000434773 2384 ntBASIC13.28□□□□□ -0.28
LMO3Q8TAP4 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 GP1BA-201ENST00000329125 2501 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC13.27□□□□□ -0.28
LMO3Q8TAP4 AL590483.3-201ENST00000623669 3580 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 LINC00339-201ENST00000404210 1189 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 EEF1DP5-201ENST00000431410 772 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 AL135929.2-201ENST00000445687 505 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 NEK4P3-201ENST00000604859 544 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 LINC00339-213ENST00000642137 222 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 WDR92-203ENST00000409164 1517 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 WASH2P-201ENST00000453662 1684 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 RHBDL2-202ENST00000372990 1837 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 OACYLP-201ENST00000417918 2208 ntBASIC13.27□□□□□ -0.29
LMO3Q8TAP4 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO3Q8TAP4 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LMO3Q8TAP4 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms