Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RITA1Q96K30 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RITA1Q96K30 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.51■□□□□ 0.39
RITA1Q96K30 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 AC135279.3-201ENST00000610945 1311 ntBASIC17.5■□□□□ 0.39
RITA1Q96K30 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RITA1Q96K30 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.5■□□□□ 0.39
RITA1Q96K30 PBX2P1-201ENST00000493219 1291 ntBASIC17.5■□□□□ 0.39
RITA1Q96K30 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.5■□□□□ 0.39
RITA1Q96K30 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 AC110285.6-201ENST00000617652 491 ntBASIC17.5■□□□□ 0.39
RITA1Q96K30 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
RITA1Q96K30 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.5■□□□□ 0.39
RITA1Q96K30 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RITA1Q96K30 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RITA1Q96K30 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RITA1Q96K30 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 LINC00565-201ENST00000562710 2331 ntBASIC17.49■□□□□ 0.39
RITA1Q96K30 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.49■□□□□ 0.39
RITA1Q96K30 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RITA1Q96K30 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.48■□□□□ 0.39
RITA1Q96K30 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
RITA1Q96K30 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RITA1Q96K30 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
RITA1Q96K30 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.48■□□□□ 0.39
RITA1Q96K30 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.48■□□□□ 0.39
RITA1Q96K30 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.48■□□□□ 0.39
RITA1Q96K30 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RITA1Q96K30 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.47■□□□□ 0.39
RITA1Q96K30 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RITA1Q96K30 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RITA1Q96K30 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.47■□□□□ 0.39
RITA1Q96K30 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.47■□□□□ 0.39
RITA1Q96K30 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.47■□□□□ 0.39
RITA1Q96K30 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RITA1Q96K30 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RITA1Q96K30 AC092053.2-201ENST00000640557 1818 ntBASIC17.47■□□□□ 0.39
RITA1Q96K30 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.47■□□□□ 0.39
RITA1Q96K30 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RITA1Q96K30 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RITA1Q96K30 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RITA1Q96K30 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RITA1Q96K30 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RITA1Q96K30 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.46■□□□□ 0.39
RITA1Q96K30 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.46■□□□□ 0.39
RITA1Q96K30 AC106739.1-201ENST00000617035 715 ntBASIC17.46■□□□□ 0.39
RITA1Q96K30 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RITA1Q96K30 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RITA1Q96K30 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RITA1Q96K30 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RITA1Q96K30 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RITA1Q96K30 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RITA1Q96K30 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RITA1Q96K30 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RITA1Q96K30 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.45■□□□□ 0.38
RITA1Q96K30 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms