Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 SLC47A1P1-202ENST00000449666 945 ntBASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDRT4Q8N9R6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AC010141.3-201ENST00000456659 717 ntBASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AC079089.2-201ENST00000531211 1277 ntBASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AC024257.2-201ENST00000549699 147 ntBASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 MIR4767-201ENST00000582827 78 ntBASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AC135279.3-201ENST00000610945 1311 ntBASIC20.22■□□□□ 0.83
CDRT4Q8N9R6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 AP005435.1-201ENST00000529293 1178 ntBASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT4Q8N9R6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.2■□□□□ 0.82
CDRT4Q8N9R6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 BX842568.3-201ENST00000418104 571 ntBASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 AC096631.2-201ENST00000436136 790 ntBASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.19■□□□□ 0.82
CDRT4Q8N9R6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDRT4Q8N9R6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDRT4Q8N9R6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms