Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SREK1IP1Q8N9Q2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SREK1IP1Q8N9Q2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 CAHM-201ENST00000604200 896 ntBASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.01■□□□□ 0.47
SREK1IP1Q8N9Q2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 AC136428.2-201ENST00000563187 214 ntBASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SREK1IP1Q8N9Q2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 MIR762-201ENST00000390236 83 ntBASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.99■□□□□ 0.47
SREK1IP1Q8N9Q2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SREK1IP1Q8N9Q2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SREK1IP1Q8N9Q2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 AC092053.2-201ENST00000640557 1818 ntBASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 AC005559.1-201ENST00000589661 871 ntBASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SREK1IP1Q8N9Q2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SREK1IP1Q8N9Q2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SREK1IP1Q8N9Q2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms