Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 AL592295.1-201ENST00000400984 884 ntBASIC18.97■□□□□ 0.63
CCDC190Q86UF4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC190Q86UF4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC190Q86UF4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 LINC01960-201ENST00000563759 1884 ntBASIC18.94■□□□□ 0.62
CCDC190Q86UF4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC190Q86UF4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 ECEL1P2-201ENST00000461596 1295 ntBASIC18.93■□□□□ 0.62
CCDC190Q86UF4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC190Q86UF4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC190Q86UF4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms