Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 MIR935-201ENST00000401179 91 ntBASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHMP1BQ7LBR1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMP1BQ7LBR1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CHMP1BQ7LBR1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 AL353803.4-201ENST00000565882 1934 ntBASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP1BQ7LBR1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP1BQ7LBR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 C9orf163-202ENST00000624034 2573 ntBASIC19.87■□□□□ 0.77
CHMP1BQ7LBR1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP1BQ7LBR1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms