Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.98■■□□□ 1.27
MMP8P22894 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 C11orf96-202ENST00000528572 1834 ntBASIC22.98■■□□□ 1.27
MMP8P22894 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MMP8P22894 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.97■■□□□ 1.27
MMP8P22894 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.97■■□□□ 1.27
MMP8P22894 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.97■■□□□ 1.27
MMP8P22894 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.97■■□□□ 1.27
MMP8P22894 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MMP8P22894 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
MMP8P22894 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
MMP8P22894 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
MMP8P22894 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
MMP8P22894 AC079089.2-201ENST00000531211 1277 ntBASIC22.96■■□□□ 1.27
MMP8P22894 AC024257.2-201ENST00000549699 147 ntBASIC22.96■■□□□ 1.27
MMP8P22894 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 MIR4767-201ENST00000582827 78 ntBASIC22.96■■□□□ 1.27
MMP8P22894 AL136162.1-201ENST00000607711 1078 ntBASIC22.96■■□□□ 1.27
MMP8P22894 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
MMP8P22894 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.96■■□□□ 1.27
MMP8P22894 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MMP8P22894 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.95■■□□□ 1.27
MMP8P22894 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.95■■□□□ 1.26
MMP8P22894 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.95■■□□□ 1.26
MMP8P22894 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.95■■□□□ 1.26
MMP8P22894 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
MMP8P22894 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MMP8P22894 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MMP8P22894 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
MMP8P22894 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
MMP8P22894 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MMP8P22894 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.94■■□□□ 1.26
MMP8P22894 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
MMP8P22894 AC010141.3-201ENST00000456659 717 ntBASIC22.94■■□□□ 1.26
MMP8P22894 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MMP8P22894 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.94■■□□□ 1.26
MMP8P22894 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
MMP8P22894 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MMP8P22894 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MMP8P22894 AC135279.3-201ENST00000610945 1311 ntBASIC22.93■■□□□ 1.26
MMP8P22894 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.93■■□□□ 1.26
MMP8P22894 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.93■■□□□ 1.26
MMP8P22894 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.93■■□□□ 1.26
MMP8P22894 AP005435.1-201ENST00000529293 1178 ntBASIC22.93■■□□□ 1.26
MMP8P22894 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MMP8P22894 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
MMP8P22894 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MMP8P22894 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
MMP8P22894 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
MMP8P22894 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.93■■□□□ 1.26
MMP8P22894 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
MMP8P22894 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
MMP8P22894 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.92■■□□□ 1.26
MMP8P22894 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
MMP8P22894 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP8P22894 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP8P22894 AC096631.2-201ENST00000436136 790 ntBASIC22.92■■□□□ 1.26
MMP8P22894 AC087239.1-201ENST00000622671 572 ntBASIC22.92■■□□□ 1.26
MMP8P22894 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.92■■□□□ 1.26
MMP8P22894 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP8P22894 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
MMP8P22894 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP8P22894 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP8P22894 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
MMP8P22894 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP8P22894 BX842568.3-201ENST00000418104 571 ntBASIC22.91■■□□□ 1.26
MMP8P22894 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.91■■□□□ 1.26
MMP8P22894 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.91■■□□□ 1.26
MMP8P22894 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.91■■□□□ 1.26
MMP8P22894 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MMP8P22894 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.9■■□□□ 1.26
MMP8P22894 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MMP8P22894 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MMP8P22894 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MMP8P22894 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
MMP8P22894 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
MMP8P22894 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.9■■□□□ 1.26
MMP8P22894 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms