Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SERBP1P1-201ENST00000396021 1160 ntBASIC21.71■■□□□ 1.07
GPC4O75487 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GPC4O75487 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.71■■□□□ 1.07
GPC4O75487 AL138724.1-201ENST00000606771 1088 ntBASIC21.71■■□□□ 1.07
GPC4O75487 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GPC4O75487 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GPC4O75487 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GPC4O75487 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.7■■□□□ 1.07
GPC4O75487 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
GPC4O75487 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
GPC4O75487 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GPC4O75487 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GPC4O75487 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
GPC4O75487 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.7■■□□□ 1.06
GPC4O75487 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.7■■□□□ 1.06
GPC4O75487 AC137767.1-201ENST00000602918 1920 ntBASIC21.7■■□□□ 1.06
GPC4O75487 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GPC4O75487 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
GPC4O75487 AC133637.1-201ENST00000624115 1537 ntBASIC21.7■■□□□ 1.06
GPC4O75487 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC4O75487 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
GPC4O75487 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC4O75487 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC4O75487 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC4O75487 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GPC4O75487 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.69■■□□□ 1.06
GPC4O75487 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GPC4O75487 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC4O75487 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
GPC4O75487 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
GPC4O75487 AC004687.1-201ENST00000579003 1625 ntBASIC21.68■■□□□ 1.06
GPC4O75487 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.68■■□□□ 1.06
GPC4O75487 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GPC4O75487 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.68■■□□□ 1.06
GPC4O75487 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.68■■□□□ 1.06
GPC4O75487 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.67■■□□□ 1.06
GPC4O75487 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GPC4O75487 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.67■■□□□ 1.06
GPC4O75487 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
GPC4O75487 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
GPC4O75487 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GPC4O75487 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GPC4O75487 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.66■■□□□ 1.06
GPC4O75487 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 UNC93B3-201ENST00000308076 687 ntBASIC21.66■■□□□ 1.06
GPC4O75487 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.66■■□□□ 1.06
GPC4O75487 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.66■■□□□ 1.06
GPC4O75487 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.66■■□□□ 1.06
GPC4O75487 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.66■■□□□ 1.06
GPC4O75487 AC011298.3-201ENST00000615796 283 ntBASIC21.66■■□□□ 1.06
GPC4O75487 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GPC4O75487 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
GPC4O75487 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC4O75487 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
GPC4O75487 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GPC4O75487 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC4O75487 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC4O75487 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC4O75487 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
GPC4O75487 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
GPC4O75487 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GPC4O75487 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC4O75487 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC4O75487 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.65■■□□□ 1.06
GPC4O75487 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
GPC4O75487 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GPC4O75487 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.65■■□□□ 1.06
GPC4O75487 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms