Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMX3A6NHT5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 AL020996.1-203ENST00000536896 2307 ntBASIC18.8■□□□□ 0.6
HMX3A6NHT5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMX3A6NHT5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HMX3A6NHT5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMX3A6NHT5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMX3A6NHT5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.79■□□□□ 0.6
HMX3A6NHT5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMX3A6NHT5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.78■□□□□ 0.6
HMX3A6NHT5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.77■□□□□ 0.6
HMX3A6NHT5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
HMX3A6NHT5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.77■□□□□ 0.6
HMX3A6NHT5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.77■□□□□ 0.6
HMX3A6NHT5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.77■□□□□ 0.6
HMX3A6NHT5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMX3A6NHT5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
HMX3A6NHT5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMX3A6NHT5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMX3A6NHT5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.77■□□□□ 0.59
HMX3A6NHT5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMX3A6NHT5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.77■□□□□ 0.59
HMX3A6NHT5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
HMX3A6NHT5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
HMX3A6NHT5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMX3A6NHT5 HSD17B1P1-201ENST00000590052 955 ntBASIC18.76■□□□□ 0.59
HMX3A6NHT5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMX3A6NHT5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.76■□□□□ 0.59
HMX3A6NHT5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
HMX3A6NHT5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMX3A6NHT5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMX3A6NHT5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMX3A6NHT5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMX3A6NHT5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.75■□□□□ 0.59
HMX3A6NHT5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.75■□□□□ 0.59
HMX3A6NHT5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.75■□□□□ 0.59
HMX3A6NHT5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.75■□□□□ 0.59
HMX3A6NHT5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.75■□□□□ 0.59
HMX3A6NHT5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMX3A6NHT5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMX3A6NHT5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HMX3A6NHT5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMX3A6NHT5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMX3A6NHT5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMX3A6NHT5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms